Cereibacter azotoformans: LV780_08300
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Entry
LV780_08300 CDS
T07975
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cazt
Cereibacter azotoformans
Brite
KEGG Orthology (KO) [BR:
cazt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cazt03016
]
LV780_08300 (thpR)
Enzymes [BR:
cazt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LV780_08300 (thpR)
Transfer RNA biogenesis [BR:
cazt03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LV780_08300 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
UIJ29313
LinkDB
All DBs
Position
1:complement(1670698..1671249)
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AA seq
183 aa
AA seq
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MIRAFVAIPLPEAIRSALVLQQFLLPLPRKIEPENLHLTLLFLGEVPGPVLEAAHEGLAG
IVMPPFRLEIAGLGLFGGDRPRAAWAGVTASAPLERLQAKVERAARVAGIAPERRRFRPH
VTLGRFSPPPPEERMRLERAVAGGAASQAGAFDVTRFVLYRSFLGPKGARYEELAEYPLN
GGQ
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgcctttgtcgccatcccgctgcccgaggcgatccgttcggccctcgtcctg
caacagttccttctgccgctgccgcgcaagatcgagcccgagaacctccacctgacgctt
ctgtttctgggcgaggtgccggggccggtgctggaggccgcgcacgaggggcttgccggg
atcgtcatgccgcccttccggctggagatcgcggggctcgggctcttcggcggtgaccgg
ccccgcgccgcatgggcgggtgtcacagcttcggcgccgctggagcgtcttcaggccaag
gtcgagcgtgccgcgagagtggccgggatcgcgcccgagcgccgccggttcaggccccac
gtcacgctcggccgcttttcgccgcccccgcccgaggagcggatgcggctcgagcgcgcc
gtggccgggggggctgcctcgcaggcgggcgccttcgatgtgacgcgcttcgtcctctac
cggtcattcctcggccccaagggcgcgcgctacgaggagctggcggagtatccgctaaac
ggaggtcagtag
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