Cereibacter azotoformans: LV780_13490
Help
Entry
LV780_13490 CDS
T07975
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cazt
Cereibacter azotoformans
Pathway
cazt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cazt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LV780_13490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cazt03019
]
LV780_13490
03009 Ribosome biogenesis [BR:
cazt03009
]
LV780_13490
Enzymes [BR:
cazt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LV780_13490
Messenger RNA biogenesis [BR:
cazt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LV780_13490
Ribosome biogenesis [BR:
cazt03009
]
Prokaryotic type
rRNA helicases
LV780_13490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
UIJ30300
LinkDB
All DBs
Position
1:2694695..2696989
Genome browser
AA seq
764 aa
AA seq
DB search
MTHTDIAAPLAAALAAKGYESLTPVQEAVLAEGVAGRDALVSAQTGSGKTVAFGIAVADQ
ILQGADRLLFADTPIALAIAPTRELALQVARELGWLYAEAGAQIATCVGGMDYRTERRAL
ERGAHIVVGTPGRLRDHIERGSLDLTGLRAVVLDEADEMLDLGFREDLEFILGSAPEERR
TLMFSATVPKEIEALAKEFQQDAVRIQTAGERKQHADIEYRVLTVSARDREHAIFNVLRF
YEAPSAIVFCKTRMAVNHLLARMGNRGFQVVALSGELSQQERTHALQALRDGRARVCIAT
DVAARGIDLPGLELVIHADLPTNSETLLHRSGRTGRAGAKGVSVLIAAPSEVRKAQRLLS
GAKLVADWGKPPSADEVQERDDARLLEHPVLGQDLSEEMPLAEKLLERFGPAQMASAFVR
LWREARSAPEVLQDVAPPEPAQRAPRERGEFGEAVWYSVGVGHTGRAEARWLLPKICEAG
GVTKNEIGAIRVQQEQTFVQIAKAAAKKFGDALEIEAGVGMVRLEGEPSLERPERAPRKP
FAERTARTRDEAPRREKAPYQPKPSRFVEEERDEAPRSGWTPDDRPARPRREDSGHVAKR
EMQEGTGARREGSDEGRKPRQPQGERPARPAYKGAATRAEGTGRSAGYKSHGGTAGRSTG
YKSHGAAGDDAPRGKPRGEGAPRAAGFKSHDKPARDETGPRERGPDARPARPSGYKGARD
DRPAKPRAEGGAKKDFAKKDAPRKPRADASDTSRRFTPPKKPRG
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgacccataccgatattgccgcgccgctggccgcggcgcttgccgccaagggctacgag
tccctcacccccgtgcaggaggccgtgctcgccgaaggcgtggccggacgcgacgcgctc
gtctcggcccagaccggctcgggcaagaccgtggccttcggcatcgccgtggccgaccag
atcctgcagggcgccgaccggctcctgttcgccgacacgccgatcgcgcttgccatcgcc
cccacccgcgagctggcgctgcaggtcgcgcgcgagcttggctggctctatgccgaagcc
ggcgcccagattgccacctgcgtcggcggcatggactaccgcaccgagcgtagggcgctc
gaacgcggcgcccatatcgtcgtcggcacccccggccgcctgcgcgaccatatcgagcgc
ggctcgctggatctgaccggcctgcgcgccgtggtgctggacgaggccgacgagatgctc
gacctcggcttccgcgaggatctggagttcatccttggctccgcccccgaggaacgccgc
acgctgatgttctcggccaccgtgccgaaggagatcgaggcgctggccaaggagttccag
caggacgccgtccgcatccagaccgcgggcgagcgcaagcagcatgccgacatcgagtat
cgcgtcctgaccgtcagcgcgcgcgaccgggaacatgcgatcttcaacgtgctgcgcttc
tacgaggcgccctcggcgatcgtcttctgcaagacgcggatggcggtgaaccatcttctc
gcgcggatgggcaaccgcggctttcaggtcgtggcgctctcgggcgagctgtcgcagcag
gagcggacccatgcgctgcaggcgctgcgcgacgggcgcgcgcgggtctgcatcgcgacc
gacgtggccgcgcgcggcatagaccttccggggctcgaactggtgatccacgccgatctg
cccaccaactccgagacgctgctgcaccgctcgggccggaccggccgcgcgggcgccaag
ggcgtgtcggtgctgatcgccgcgccctccgaggtgcgcaaggcgcagcggctgctgtcc
ggggcgaagctcgtggccgactggggcaagccgccctcggccgacgaggtgcaggaacgc
gacgacgcgcggctgctcgaacatccggtgctcgggcaggatctgtccgaggagatgccg
ctggccgagaagctgctcgagcggttcggccccgcgcagatggcgtcggccttcgtgcgg
ctctggcgcgaggcgcgttcggcgcccgaggtgcttcaggacgtggccccgcccgaaccc
gcgcagcgcgcgccgcgcgaacggggcgagttcggcgaggccgtctggtattcggtgggc
gtgggccacaccggacgcgccgaggcgcgctggctgctgcccaagatctgcgaagcgggc
ggtgtcaccaagaacgagatcggcgcgatccgcgtccagcaggagcagaccttcgtccag
atcgccaaggcggccgccaagaagttcggcgacgcgctcgagatcgaggccggcgtgggc
atggtccggctggagggcgaaccctcgctcgagcggccggaacgcgcgccgcgcaagcct
ttcgccgagcgcacggcccgcacgcgggacgaggccccgcggcgcgagaaggcgccttac
cagcccaagccctcgcgcttcgtcgaggaggagcgggacgaggctccgcgcagcggctgg
acgcccgacgaccgccccgcccgcccccggcgcgaggacagcgggcatgtcgcgaagcgc
gagatgcaggaaggcaccggcgcccgccgcgagggctctgacgaggggcgcaagccgcgg
cagccgcagggcgaacgtccggcgcggcccgcctacaagggcgcggccacgcgggccgag
ggcaccggccgctcggccggctacaagtcgcacggcggaacggccggccggtccaccggc
tacaagtcgcacggtgctgccggcgacgacgccccccgcggcaagccgcgcggcgagggc
gcgccgcgggcggcgggcttcaaatcccatgacaagccggctcgggacgagacaggcccg
cgcgagcgcggcccggatgcccgcccggcccgtccgtcgggctacaagggcgcgcgcgac
gaccggcccgcaaagccgcgcgccgaagggggcgccaagaaggacttcgccaagaaggac
gctccgcggaaaccgcgcgcggatgcctcggacacgagccgccgtttcacgcctccgaaa
aagccgcgcggctga
DBGET
integrated database retrieval system
