Cereibacter azotoformans: LV780_17470
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Entry
LV780_17470 CDS
T07975
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
cazt
Cereibacter azotoformans
Pathway
cazt02020
Two-component system
cazt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cazt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LV780_17470 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LV780_17470 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cazt03021
]
LV780_17470 (rpoN)
Transcription machinery [BR:
cazt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LV780_17470 (rpoN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Crp_2
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UIJ32134
LinkDB
All DBs
Position
2:493048..494343
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AA seq
431 aa
AA seq
DB search
MKSRQRISIAQTQRLQLNLGLTASIRILSSDAEGLTRYLEEQAGENPHIQLERVQSAEWL
PRWTSVLPRMAHGDGPPVEAAGAAGPSLMAHVMGQIDRLFPKGPERRIAMLLAEGLEPTG
WLGTDPVQVAGQARVAVAEVEAVLARLQRIEPAGLFARNLAECLRLQAVEAGRLDPALAT
MFDHLDLVAQGAHARLARMCGTDEAAILARLRLIRSFDPKPGAQFDPGAAPVREPDLIAT
LTDAGWEVALNRSALPSVRIRKPDKRPATAAARAAWTQAQAVGRMIETRNATLLRVAREI
LARQEAALDEGPAALVPLTMADVAGALEIHESTVSRVVSGTCVDTPRGTWWLRRMFSGRV
AEGGASAAAVRAAISELVAQEDAAAPLSDAALAEALAARGMPLARRTVAKYREILNIPPA
HRRRRRPVRVA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgagacagcgcatcagtatcgcccagacgcagcggttgcagctgaacctcggt
ttgaccgcctcgatccgcatcctcagctcggacgccgagggcctgacccggtatctggag
gagcaggcgggcgagaacccccacatccagctggaacgggtccagtccgccgagtggctg
ccgcgctggaccagcgtcctgccgcgcatggcgcacggggatgggccgcccgtggaggcg
gcgggggcggccgggccgagcctcatggcgcatgtgatgggccagatcgaccggctgttc
ccgaaggggcccgagcggcggatcgccatgctgctcgccgaggggttggagccgaccggg
tggctcggcaccgatcccgttcaggttgcaggtcaggcccgtgttgcggtggccgaggtc
gaggcggtgctcgcccgcctccagcggatcgagcccgcgggcctcttcgcccgcaatctt
gcggaatgcctgcggctgcaggctgtcgaggccgggcgcctcgatcccgccctcgccacc
atgttcgaccatctcgacctggtggcgcagggcgcgcatgcgcggctcgcacgcatgtgc
ggcaccgacgaggcggccatcctcgcgcgcctgcgcctgatccgcagcttcgatcccaaa
cccggcgcccagttcgaccctggcgccgcgccggtccgcgagcccgacctgatcgccacc
ctgaccgatgccggctgggaagtggcgctcaatcgctcggccctgccatccgtgcggatc
cgcaagccggacaagcgccccgcgacggccgccgcccgcgccgcctggacacaggcgcag
gcggtggggcgcatgatcgagacccggaacgcgacgctcctgcgcgtcgcgcgcgagatc
ctcgctcggcaggaggcggcactcgacgagggcccggcggcgttggtccccctcaccatg
gccgatgtggccggggcgctcgagatccacgagagcacggtgagccgggtcgtttcgggc
acctgcgtggacacgccccgagggacctggtggctacggcgcatgttcagcggccgggtg
gccgaggggggggcttcggccgcagcggtccgcgcggcgatctcggagcttgtggcgcaa
gaggatgcggcggctccgctgtcggatgcggcactggccgaggcgctggcggcccggggc
atgccgcttgcccgcaggacggtcgcgaaataccgcgagatcctgaacattccgccggcc
caccgccggcgccgccggcccgtccgcgtcgcctga
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