Clostridium botulinum A ATCC 19397: CLB_0004
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Entry
CLB_0004 CDS
T00574
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
cba
Clostridium botulinum A ATCC 19397
Pathway
cba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLB_0004 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cba03400
]
CLB_0004 (recF)
DNA repair and recombination proteins [BR:
cba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CLB_0004 (recF)
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ABS35411
UniProt:
A7FPF3
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All DBs
Position
3007..4101
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AA seq
364 aa
AA seq
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MYIKNVHLINFRNYDDMYLELSPNTNIFVGNNAQGKTNILESIYYSSIGKSHRTNKDKDL
IKWDKNNTYLRTYVSRERLDKTIDINIFKNGKKAITVNKIKIKKISELMGNLNVVMFSPE
DLRIIKDSPGNRRKFLDIELCKINNVYYHDLVQYNKILSERNTALKNWNNKINDIIDIYD
EQLSKYGAFIIKERNKYLDKLNIIGKNIHKKITNDLEDINFRYLTNIKDFDNAEKELLIV
LKKNRKKDLERNSTSIGPHRDDFEVSINNIDTRIFGSQGQQRTAVLTLKFASLEIIKNII
GEYPVLLLDDVLSELDSNRQKFVLNSIDKIQTIITCTGIEEIDKYLDKKQSQLYLVNNGK
IKRV
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaaaaatgtgcacttaataaattttagaaattatgatgatatgtatttagaa
ttaagtccaaatacaaatatttttgtaggtaataatgctcaagggaaaactaatatacta
gaaagtatatattattcaagtataggaaagtctcatagaacaaataaagataaagatctt
ataaaatgggataaaaataatacatacttaaggacatatgtatccagggaaagattagat
aaaactatagatataaatatatttaaaaatggcaaaaaagctataacagtgaataaaata
aaaataaaaaaaatatctgaactaatggggaacttaaatgttgttatgttttcgccagaa
gacttaagaataattaaggattcccctggaaatagaaggaaatttctagatatagaatta
tgtaaaataaacaatgtttattatcatgatttagtccaatataataaaattttatctgaa
agaaatacagctttaaaaaattggaataacaaaattaatgatataattgatatttatgat
gagcaactttctaaatatggagcttttataattaaagagagaaataagtatttggataaa
ttaaatattattggcaaaaatatacataagaagataaccaatgatttagaagacataaac
tttagatatttaactaatataaaagattttgataatgcagaaaaagaattattaatagtt
cttaagaaaaatcgaaaaaaagatcttgagagaaattcaacctctattggtcctcaccga
gatgattttgaagtaagtataaataatatagatactagaattttcggatcacaaggacaa
caaagaacagctgtattaactttaaagtttgcatcattggaaataataaaaaacataata
ggggaatatcctgtgcttttattagatgatgtactatctgaattagattcaaatagacag
aagtttgtattgaattctattgataaaatacaaactataataacttgtactggtatagaa
gaaatagacaaatacttagataagaaacaatctcaattatatttagttaataatggtaaa
ataaaaagagtttaa
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