Clostridium botulinum A ATCC 19397: CLB_0552
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Entry
CLB_0552 CDS
T00574
Name
(GenBank) putative ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cba
Clostridium botulinum A ATCC 19397
Pathway
cba03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cba00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CLB_0552
09124 Replication and repair
03420 Nucleotide excision repair
CLB_0552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cba03021
]
CLB_0552
03036 Chromosome and associated proteins [BR:
cba03036
]
CLB_0552
03400 DNA repair and recombination proteins [BR:
cba03400
]
CLB_0552
Enzymes [BR:
cba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CLB_0552
Transcription machinery [BR:
cba03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CLB_0552
Chromosome and associated proteins [BR:
cba03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CLB_0552
DNA repair and recombination proteins [BR:
cba03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CLB_0552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
PDDEXK_1
Helicase_C
ResIII
PhoH
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ABS33254
LinkDB
All DBs
Position
578714..581068
Genome browser
AA seq
784 aa
AA seq
DB search
MECKDEVNISVRNLVEFILRNGDIDIGYLGGSRAQEGIKAHKKLQKIRMESATPLLMIEY
EKEVLLKYAIEYKDFLFKVEGRADGIIIENDSITIEEIKTTTKNLDEIKDNLLHWAQAKC
YAFIYSKEKNLEKINVKLTYYNIKNENIKSIDKTFKIQELEEFFYDIIHKYYVWIEFNYK
FKQERNRDIKLLKFPFKEYREGQRKLAVSVYKTISENKNIFIEAPTGIGKTISTIFPSVK
AIGEGKIDKIFYLTAKNTTRDFVLSNFKNMINRGMAFKVITLISKEKICLKEEFKCSSEK
CEFAKGHFDRINEAILDILNNENIIDETVIKKYALKHKVCPFEFSLDISLWCDGIICDYN
YVFDPRVYLRRFFSDGKDDFVLLIDEAHNLLDRSREMFSSSISKNNVLSLRKSIKDKSKA
LYRILGKINKELLDIKKIYEVDNYYMEKEKPEKLQILLNNFTSEIEVLMMKGNLQIDDEL
LNFYFEALYFLKICELYGDNYITYGEEYNSDFTIKLFAIDTSGLLNEILKKSKANVFFSG
TFSPIKYFREVLGGDDEDYVLKLNSPFPIENHRILIGYNVSTKYKNRCKSYENICDYINM
ACKIKKGNYMVFFPSYKYMKEVFLLYKEKYSEENVIVQNSSMSDEEREEFIDKFEKEKEN
VIGFCVLGGIFSEGIDLTGDKIIGAIIIGVGLPQICVERNLIKNYYDDKKQSGFQYSYIY
PGMTKVMQAAGRVIRTELDKGIILLIDERFNSYSYKELFPKHWYPNINVKNEKELEGALK
EFWN
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtaaagatgaagtgaatatatccgttagaaatttagtggagtttatattaaga
aacggagatattgatattggatatttggggggaagcagagctcaagaagggataaaagca
cataagaagttgcaaaaaattaggatggaaagtgctacccctttactcatgattgaatat
gagaaagaagttttattaaaatatgctatagaatataaggattttttatttaaagtagag
ggaagagcagatggaattattatagaaaatgactctattactatagaagagattaagact
acaactaaaaacttggatgaaattaaagataatttactgcactgggctcaagctaagtgt
tacgcctttatttattcaaaggagaaaaatcttgaaaaaattaatgttaaattaacttat
tataatattaaaaatgaaaacattaaaagtatagataaaacttttaaaatacaggaatta
gaagaatttttttatgatattatacataaatattatgtttggatagagtttaattataaa
tttaagcaggaaagaaatagggacattaaattattaaagtttccctttaaagaatataga
gaaggccaaagaaaattagctgtatctgtttataagactataagtgaaaataaaaatata
tttatagaagctcctacaggtatagggaaaactatttctacaatattccctagtgttaag
gctataggagaaggtaaaatagataaaattttttatttaacagctaagaatactacgaga
gattttgttttgagtaattttaaaaatatgataaataggggaatggcttttaaagttatt
accttaatttctaaggaaaagatttgtcttaaagaggagtttaaatgttcatcggaaaag
tgtgagtttgctaaaggtcattttgatagaataaatgaagctatattagatattttaaat
aatgaaaatattatagatgaaaccgttattaaaaaatatgcgttaaaacataaagtttgt
ccctttgaattttctttagatataagtttatggtgtgatgggataatctgtgattataat
tatgtttttgatcctagagtatatttaagaagatttttttctgatgggaaggatgatttt
gtattactgatagatgaagctcataatttattagatagatctagagaaatgttttcttca
tctatatctaaaaataatgttttaagtttaagaaaatctattaaagataaaagtaaagct
ttatatagaattttaggaaaaataaataaagaacttttagatataaaaaaaatatatgaa
gtggataattattatatggaaaaagaaaagccagaaaagctgcaaatattattaaataat
tttacatcagagattgaagtgcttatgatgaaaggaaaccttcaaatagatgatgaatta
cttaatttttattttgaggctttatattttctaaagatatgtgaattatatggagataat
tatataacctatggagaagaatataatagtgattttacaattaaactttttgctatagat
acttcaggtttattaaatgaaattttaaaaaagtcaaaggcaaacgtatttttttcagga
accttttctcctataaaatatttcagagaagttttaggaggagatgatgaagattatgtt
ttaaaattaaattctccttttccaatagaaaaccataggattttaataggttacaatgtt
tctacaaaatataaaaatagatgcaaaagctatgagaatatatgtgattatataaatatg
gcctgcaaaataaaaaaaggaaactatatggtttttttcccatcctataaatatatgaaa
gaagtttttttattatataaagaaaaatattcagaagagaatgttatagttcaaaattct
tctatgagtgatgaagagagagaagaatttatagataaatttgaaaaagaaaaagaaaat
gtaataggtttttgcgtattgggtgggattttttcagaaggaattgatttaacaggggat
aaaataataggagctataataataggagtaggattaccacaaatatgtgtagaaagaaat
ctaataaagaattattatgatgataagaaacagtctggctttcagtattcatatatttat
ccgggaatgactaaagttatgcaggctgctggtagggtaataagaacagagctggataaa
ggaataatactacttattgatgaacggtttaatagttattcctataaagagttattccct
aaacactggtatcctaatattaatgtgaaaaatgagaaagaattagaaggagctttaaag
gaattttggaattaa
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