Clostridium botulinum A ATCC 19397: CLB_2279
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Entry
CLB_2279 CDS
T00574
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cba
Clostridium botulinum A ATCC 19397
Brite
KEGG Orthology (KO) [BR:
cba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cba03016
]
CLB_2279 (truB)
Enzymes [BR:
cba01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CLB_2279 (truB)
Transfer RNA biogenesis [BR:
cba03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLB_2279 (truB)
Prokaryotic type
CLB_2279 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ABS33508
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All DBs
Position
complement(2418300..2419169)
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AA seq
289 aa
AA seq
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MDGVINVLKPKGITSFDVVRDIRKIAKIKKVGHTGTLDPLASGVLPVCIGKATKIVDYIM
EGTKTYRVEMKLGTTTDTYDREGTVLEEKEIDLTPIEVEETIKKYIGDIDQVPPMYSALK
INGQKLYDLARKGIEVEREARKIHIYDICILSIDLPYVIFDVKCSKGTYIRSLCFDIGKD
LDSGAVMWNLQRLEASPFNIKEAIKLEDLNEENIKQYITPIDEALKDYEKLSLDKKFEKL
VLNGVILKDRRVLDNIEENKLYRTYIEDDNFIGLGMKNAYGFKIHKLLT
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatggagtaataaatgttttaaaaccaaaggggataacatcctttgatgtagttaga
gacataagaaaaatagcgaaaataaaaaaagtcggtcatacaggtacattagatccctta
gcttctggtgttctccctgtatgtataggtaaggctaccaaaatagttgattatataatg
gaaggaactaaaacctacagagtagaaatgaaacttggaactaccacagacacttatgat
agagaaggtactgtattagaggaaaaagaaatagatctaactcctatagaggtagaagag
actattaaaaaatatataggagacatagatcaagtacctcctatgtattctgccttaaaa
attaatggacaaaaactttatgacttggccagaaaaggtatagaagtagaaagagaagca
agaaaaatacatatatatgatatatgtattttaagtatagatttgccctatgttatattt
gatgttaagtgttcaaagggaacttatataagaagtttgtgttttgatataggaaaggat
ttagattctggagcagtaatgtggaatctacaaagattagaagcaagcccctttaatata
aaagaagcaataaaattagaagatttaaatgaggaaaatataaaacagtatataacacct
atagatgaagctttaaaggattatgaaaaattatctttagataaaaaatttgaaaaactt
gtactaaatggtgtaatattaaaagatagaagagttctagataatatagaagaaaataaa
ctatatagaacttatatagaagatgataattttataggattaggaatgaaaaatgcatat
ggatttaaaattcataaattattaacttag
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