Clostridium botulinum A ATCC 19397: CLB_2287
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Entry
CLB_2287 CDS
T00574
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
cba
Clostridium botulinum A ATCC 19397
Pathway
cba03030
DNA replication
cba03430
Mismatch repair
cba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLB_2287 (polC)
03430 Mismatch repair
CLB_2287 (polC)
03440 Homologous recombination
CLB_2287 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cba03032
]
CLB_2287 (polC)
03400 DNA repair and recombination proteins [BR:
cba03400
]
CLB_2287 (polC)
Enzymes [BR:
cba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLB_2287 (polC)
DNA replication proteins [BR:
cba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLB_2287 (polC)
DNA repair and recombination proteins [BR:
cba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLB_2287 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
HHH_6
Rv2179c-like
tRNA_anti-codon
RNase_H_2
DEDDh_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ABS34495
LinkDB
All DBs
Position
complement(2425391..2429689)
Genome browser
AA seq
1432 aa
AA seq
DB search
MENTSVGDLQKEINKERFDTDKEIKIVRVQYFRKKNKLRIILKSIGNFTKEKEDHIKNIL
KKRFSMVEDFEIICYKDLSNITLEELSKKYWVDIVNLASSSVPIARDCLLKSKREVLEDS
INITYNNEFLCRFLSKNKFEGKLKSYIRDIFGIKCNIKLEYDKSFNEEDYFKTIETMEKS
MIKNVLSEIKSKEKKVIRKENSPKTREEENKDTSVILGRSIKEDSIFMKDLNENSGIVVV
CGDVFKKEVIETKTGRKIVTFFITDYTNSMTVKLFPRPRDADRIIEEIKEGIYCKVRGEV
VNDPYARECVIMAKDIVKTTKIEKMDIAEEKRVELHMHSQMSAMDGMTPVSELVKRAAKW
GHKAVAITDHGVVQAYPDAMSAAKKGNIKVIYGIEAYLVDDGVPIVSKAGDKTIEDTFVV
FDLETTGFSSKNDKIIEIGAVKIEKGKIVDRFSEFVNPERSIPDKITELTSITDDMVDDK
EAIDKILPRFIDFIGDSVVVAHNASFDVSFINKNCKDLKIEFENSVMDTVTLSRFLFPEL
KRYKLNVIAKHLGISLENHHRAVDDAKATADILLKSFEMLREKEIITLHSLNKEFLGNIN
IKKEPTHHLIILAKNAVGLKNLYKLVSKSNLEYFFKRPRMAKSLINEYKEGLIIGSACEA
GQIYKEILKGKTKEELKNMIDFYDYLEIQPLGNNEFLVKNGSVKDEKELEEINKKICELG
EFYNKPVVATCDVHFLDEEHEVFRRILMSGQGFSDADNQPPLYFRTTEEMLKEFEYLGEE
KAKEVVIYNTNKIADMIDEIKPIPEETFPPKIEGAEEDIRRMTIEKAHSIYGDPLPEIVE
KRLTKELNSIINNGYAVLYLIAHKLVAKSYEDGYLVGSRGSVGSSFAATMSDITEVNGLP
PHYVCPKCKYSEFFTDGSVGSGADLEDKDCPNCGTKLIKDGHDIPFETFLGFEGDKEPDI
DLNFSGEYQGVVHKYTEVLFGKGHVFKAGTIGTIAEKTAYGFVKKYLDEKNIKANNAEIE
RLSKGCTGVKRTSGQHPGGIMVVPADNEIFNFTPIQHPADDTESDVITTHFDYHSISGRL
LKLDILGHDDPTVLRMLQDLTQVDPKSVPLGDPKVISLFTSPEALGVTEEDIDCPVGTYG
LPEFGTKFVRQMLLDTKPKSFAELVRISGLSHGTDVWLNNAQYFIKEGYTTIKDCISTRD
DIMVYLLQKELPPKSAFTIMEKVRKGKGLTEEQEALMKEHDVPDWYIESCKKIKYMFPKG
HAVAYVMMAMRIAYFKVYYPRAYYATYFSVRADDFDADLIVKGEEKIKEKMNELYAMGNN
ITQKDKGLLTILEICYEMYKRGIKFLKVDLYKSNATKFLIEGDSIRPPLSALQGVGKNAA
KSIEEARLEGEFISKEDLRLRTKATKTVIETLENHGCLRGMQETNQISLFSL
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatacttcagttggtgatttgcaaaaggaaataaataaagaaaggtttgataca
gataaagaaataaaaatagtaagagttcagtattttagaaaaaaaaataaactaagaata
atactaaaatccattggtaattttactaaagaaaaagaagaccatataaaaaatatatta
aagaagagattttctatggtggaggattttgaaataatctgctataaagatctatccaat
attaccctagaggaactttcaaaaaaatattgggtagatatagtgaatttagcttcttct
tctgtacctattgcaagggattgtcttttaaaatctaaaagagaagtgctagaagatagt
ataaatataacctataacaatgaatttttatgtaggtttctttcaaaaaataaatttgaa
ggcaaactgaaatcctatataagagatatatttggaataaaatgcaatataaaattagaa
tatgataaatcttttaatgaagaagattattttaaaactatagaaactatggaaaagtct
atgataaagaatgttttgagtgagattaagtctaaagaaaagaaagtcattagaaaagaa
aattctccaaagactagggaagaggagaataaggatacttctgtcatattaggaagaagt
ataaaagaagatagtatattcatgaaggatttaaatgaaaattctggtatagtagtggta
tgtggagatgtatttaaaaaagaagttatagaaacaaagactgggagaaaaatagtaact
tttttcataacagattacaccaattctatgacagttaaacttttcccaaggcctagagat
gcagatagaataatagaggaaataaaagaggggatttattgcaaagttagaggagaagta
gtaaatgacccttacgcaagagaatgcgtaataatggctaaggatatagtaaaaactaca
aaaatagaaaaaatggatatagcagaggaaaaaagagtagaacttcatatgcatagtcaa
atgagtgccatggatggaatgactccagtatcagaattagtgaaaagagctgctaaatgg
gggcataaagcagtggctattacagatcatggtgtagttcaggcttatccagatgcaatg
tctgcagctaaaaaaggtaatataaaagttatatacggaatagaagcttatcttgtagat
gatggagtacctattgtatctaaagcaggggataaaaccatagaggatacttttgtagtt
tttgatttagaaactacaggcttttccagcaaaaacgataaaataatagaaataggtgca
gtaaagatagaaaagggaaaaatagtagataggtttagtgaatttgtaaatccagaaagg
agcataccagacaaaataacagaacttacaagcataacagatgatatggtagatgataaa
gaagctatagataaaatacttccaagatttatagattttataggagactctgtggtggtt
gctcataatgcaagctttgatgtgtcttttataaataaaaattgtaaagatttaaaaata
gaatttgaaaatagtgtaatggatacggtgacactaagcagatttttatttcctgaatta
aagagatataaattaaatgttatagcaaagcatttaggtatatccttagaaaatcatcat
agagctgtagatgatgctaaagccacagcagatatcttattaaaatcttttgaaatgtta
agagaaaaagaaataattaccttacatagtttaaataaagagtttttaggaaatataaat
ataaaaaaagagcccacccatcatttaataattttggctaaaaatgcagtaggtcttaaa
aatttatataaattagtttctaaatctaatttggagtatttctttaaaagaccaagaatg
gctaaaagtcttataaatgagtataaagaaggacttataataggttctgcctgtgaggcc
ggtcaaatatataaagaaatattaaagggaaaaacaaaagaagaattaaaaaatatgata
gatttttatgattatttagaaatacaacctctaggtaataatgaattccttgtaaaaaac
ggttccgtaaaagatgagaaagagcttgaagaaataaataaaaagatatgtgaattaggt
gagttttataataaacctgtagtagctacctgtgatgtgcattttttagatgaagaacat
gaagtatttagaagaatattaatgtcaggtcaaggctttagtgatgcagataatcaacca
ccactttattttagaaccacagaggaaatgcttaaagaatttgaatatttaggagaggaa
aaggctaaagaagtagtaatttataatacaaataagatagcagatatgatagatgaaata
aaaccaattccagaggaaacttttccgcctaagatagagggagcagaagaagatataaga
agaatgactatagaaaaggctcattctatatatggagatccgcttcctgaaatagtagaa
aaaagattaacaaaagaattaaattctataataaacaatggttatgctgtactttattta
atagctcataagctagtggccaaatcctatgaagatggatatttagtaggatccagagga
tctgttggatcttcctttgcagctactatgtcagatattacagaagttaatggattacca
cctcattatgtttgtcctaaatgtaaatatagtgaattctttacggatgggtctgtaggt
tcaggagcggatttagaggataaggattgcccaaattgcggaactaaattaataaaagat
ggtcatgatataccttttgaaacttttttaggtttcgaaggggataaagaaccagatata
gatttaaatttttcaggagaatatcaaggagtagttcataaatatacagaagttctattt
ggaaaagggcatgtttttaaagcaggaactattggtactatagcagaaaagactgcctat
ggttttgtaaaaaagtatttagatgaaaagaatataaaagctaacaatgcagaaatagaa
agattatctaaaggatgtacaggagttaaaaggacatcgggacaacatccaggaggaatt
atggttgtgcctgcagataatgaaatatttaactttacccctatacaacatccagcagat
gatacagaaagtgacgttataactacccattttgattatcattctataagtggtagactt
ttaaaattagatatattaggccatgacgaccctacagtacttagaatgcttcaggatttg
actcaggtagatcctaaatctgtacctctaggagatccaaaggttataagtttatttaca
tcaccagaggctttaggggttacagaggaggatatagattgtcctgtaggaacttatggg
ctcccagagtttggaactaaattcgtaagacaaatgttattagataccaaaccaaaaagt
tttgcagaattggtaagaatatcaggattatcccatggtacagatgtatggcttaataac
gctcagtattttataaaagaggggtatactactataaaggattgtatatctacaagagat
gatataatggtatatttacttcaaaaggaactgccaccaaagagcgcttttacaataatg
gaaaaagtgagaaagggtaaaggccttacagaggaacaggaagctttaatgaaagaacac
gatgtgccagattggtatatagagtcctgtaagaagataaagtatatgttccctaaaggt
catgctgtagcctatgtaatgatggccatgagaatagcttattttaaagtttattatcca
agggcttattatgctacttatttttctgttagagcggatgattttgatgcagatctaata
gtaaagggagaagaaaaaataaaagaaaaaatgaatgaattatatgctatgggcaataat
ataactcaaaaggataaaggtcttttaactatacttgaaatatgttatgaaatgtataaa
aggggaataaagtttttaaaggtagatttatataaatctaatgctactaaatttttaata
gaaggagatagtataagaccacctttaagcgcccttcaaggtgtaggaaaaaatgcagct
aaaagtatagaagaagctagattagagggcgaatttatatcaaaagaagatttaagatta
agaactaaggctacaaaaactgttatagagactttagaaaatcatggttgcttaagagga
atgcaggaaactaaccaaatatccttatttagcctttag
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