Clostridium botulinum A ATCC 19397: CLB_2745
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Entry
CLB_2745 CDS
T00574
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cba
Clostridium botulinum A ATCC 19397
Pathway
cba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLB_2745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cba03019
]
CLB_2745
03009 Ribosome biogenesis [BR:
cba03009
]
CLB_2745
Enzymes [BR:
cba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLB_2745
Messenger RNA biogenesis [BR:
cba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CLB_2745
Ribosome biogenesis [BR:
cba03009
]
Prokaryotic type
rRNA helicases
CLB_2745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DUF4422
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABS33959
LinkDB
All DBs
Position
complement(2879868..2881442)
Genome browser
AA seq
524 aa
AA seq
DB search
MENKNFENLNLNEDVLKAIQYMGFETPSAIQEKSIPVVLEGADVIAQAQTGTGKTLAFGA
PVISALCDKEKKKGVKALVLTPTRELALQIKDELKRLSKYSKTKVLPVYGGESIERQIKD
IKSGVDIVVGTPGRILDHINRRTLKLGGIDFLILDEADEMLNMGFIEDIETIMESTSEEK
QTMLFSATMPAPIKKLALNYMKKDVEHIAILKKSLTVDKIAQHYFAVKNKDKLEAICRII
DSEEPESAIIFCRTKRGVDELVEAMQSKGYNVEGMHGDMSQNQRINTLKKFKKATLNFLV
ATDVAARGIDVENISHVINYDIPQDAESYVHRIGRTGRADKEGTAYSLVTPREVSSIRQI
ERIIKSKITKKELPTLEDILEKKYDNLLNDITSKIEENKYEKFMPMVKTLEQNFDLSQVS
AALMEMLFSKEMSFDYTNDKLEAEVPVRLFLSVGRKDSINVKSLLTFIQDEASVKNHEIG
DIDILDKFTFMDVSSSTAEKIINKCSGKKLNRRKVNIEIAKSKK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaaaactttgaaaatttgaacttaaatgaagatgtactaaaagctatacaa
tatatgggatttgaaactccatctgcaatacaagaaaaatcaattccagtagtattagaa
ggagcagatgttatagctcaagctcaaacaggaacaggtaaaactttagcttttggagct
cctgtaataagcgctttgtgtgacaaggaaaagaaaaaaggcgtaaaagctttagtatta
acacctacaagagaactagcccttcaaataaaagatgagctaaagagattatctaaatat
agtaaaacaaaagtacttcctgtttatggaggagagtctatagaaagacaaataaaagat
attaaaagtggagtagatatagtggttggaactccaggaagaatattagaccacattaat
agaagaactttaaagcttggaggtattgatttcctaattttagacgaagcagatgaaatg
cttaatatgggatttatagaagatatagaaactataatggaaagtacttctgaagaaaaa
caaactatgcttttttcagctactatgccagcacctattaaaaaattagctttaaactac
atgaaaaaagatgtagagcatatagctatattaaaaaaatctttaacagtagataaaata
gcacaacattattttgcagtaaaaaataaagataaactagaagctatatgtagaataata
gattcagaagaaccagaaagtgctataatattttgtagaacaaaaagaggcgttgatgaa
ttagttgaagctatgcaatcaaagggatacaatgtagaaggtatgcatggagacatgagc
caaaatcaaagaataaatactttgaaaaaatttaaaaaagctactttaaactttttagtt
gcaacagatgtagcggctagaggtatagacgtagaaaatatatctcatgttataaattat
gatatacctcaagatgcggaatcctatgttcacagaataggaagaacaggaagagctgat
aaagaaggaacagcctattctttagttacccctagagaagtatcttctattagacaaata
gaaagaataattaagagcaaaatcaccaaaaaagaattacctactttagaggatatatta
gaaaagaaatacgataatttattaaatgatataacttctaaaatagaagaaaacaaatat
gaaaaatttatgccaatggtaaaaactttagaacaaaattttgatttatctcaagtttca
gcagctttgatggaaatgttatttagtaaagaaatgagctttgattatacaaatgacaaa
ctagaggcagaagttccagtaagattatttttaagcgtaggaagaaaagatagtataaat
gtaaaaagtttattaacatttattcaagatgaagcctctgtaaaaaatcatgaaattgga
gatatagatatattagataaatttacttttatggatgtatcatcaagcactgcagaaaag
ataataaataaatgttcaggtaaaaaattaaatagaagaaaagttaatatcgaaatagct
aaaagtaaaaaataa
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