Clostridium botulinum A ATCC 19397: CLB_2769
Help
Entry
CLB_2769 CDS
T00574
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cba
Clostridium botulinum A ATCC 19397
Brite
KEGG Orthology (KO) [BR:
cba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cba03016
]
CLB_2769 (ligT)
Enzymes [BR:
cba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CLB_2769 (ligT)
Transfer RNA biogenesis [BR:
cba03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CLB_2769 (ligT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ABS33211
LinkDB
All DBs
Position
complement(2910982..2911509)
Genome browser
AA seq
175 aa
AA seq
DB search
MRVFYAVTFYEEAKEKLIEYKNIVVNNSVKGRFTNKNNFHLTLEFIGEVDEKKLSLLTNI
LYKLQNPPKEVVTSYIGSFKRRDKEIIWLGIEENKCLITLQRELRNLLINNGFQIEDRKY
KPHITIGREIVRKGFIEKNIFPPLHIPIASIALMESKRVNNQLVYEPLEEQILVV
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgagagtattttatgcagttacattttatgaagaagcaaaagaaaaattaatagagtat
aaaaatatagttgttaataactcagttaaaggtagattcacaaataaaaataattttcat
ttaactttggagtttataggtgaagttgatgaaaaaaagttatctttactaactaatata
ctatataagttacagaatccacctaaggaagtggttacttcctatattggctcatttaaa
aggagagataaggagataatttggcttggaattgaagaaaataaatgccttatcacattg
caaagagaattaagaaatttattaattaataatggattccaaattgaggatagaaaatat
aagcctcatattacaattggtagagaaatagtaagaaagggttttatagagaaaaatatt
tttccacctctacatattccaatagcttcaatagctcttatggaaagcaagagagttaat
aaccagttagtttacgaaccattagaagagcaaattttagtagtataa
DBGET
integrated database retrieval system
