Clostridium botulinum A ATCC 19397: CLB_3039
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Entry
CLB_3039 CDS
T00574
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cba
Clostridium botulinum A ATCC 19397
Pathway
cba03030
DNA replication
cba03410
Base excision repair
cba03420
Nucleotide excision repair
cba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLB_3039 (polA)
03410 Base excision repair
CLB_3039 (polA)
03420 Nucleotide excision repair
CLB_3039 (polA)
03440 Homologous recombination
CLB_3039 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cba03032
]
CLB_3039 (polA)
03400 DNA repair and recombination proteins [BR:
cba03400
]
CLB_3039 (polA)
Enzymes [BR:
cba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLB_3039 (polA)
DNA replication proteins [BR:
cba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CLB_3039 (polA)
DNA repair and recombination proteins [BR:
cba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CLB_3039 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLB_3039 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
HHH_5
InlK_D3
Motif
Other DBs
NCBI-ProteinID:
ABS34912
LinkDB
All DBs
Position
complement(3176366..3178993)
Genome browser
AA seq
875 aa
AA seq
DB search
MNKERLLILDSNSLLNRAFYALPDLMTGEGIHTNAIYGFVNMLLKMKEEINPDYIVAAFD
RKAPTFRHEEYKDYKAGRKKMPEELAQQFPIVKELLSALAINIFEIDGFEADDLIGTLSV
FAEEKGIEVYIVTGDKDALQLATDNVKVVITKKGITEKEIYDKNRMVEEFGVTPKEFIDV
KGLMGDTSDNIPGVPGIGEKTAFKLIKEYKSIETVLENIENIKGKKLKENLHEYREQAIF
SKKLATIICNVPIDMSLEDIKSKEEYDINKVREMFERLEFKSLMNKVGKSDEEETVEEEV
SYKNIVSLEEFKDLKNNIIKYKENDLYLYFELEDIVLFSKSRVKTLYANFKDEVYRIDFE
MLIKNTKEQFIEVCKEIFESKEIKKITYDAKNPRTILRKLGIEFNGIKFDINLAAYLIDP
VRKEYEISSLASEYLFKNINREDEFLKIKEVNIMPNLYKVLEEKIKEQDMEELLYKVEQP
LTETLSAMETEGFKVDKDILLQLEKKFKGEIESTQLEIYSMSEEEFNINSPKQLGKILFE
KLDLPVIKKTKTGYSTNAEVLDKLRDKHPIIDKITYYRQLTKIYSTYIEGLKAAIDEDGK
IHSNFNQTVTATGRLSSTEPNLQNIPIKYEMGREIRKVFIPNTGDSVILSADYSQIELRV
LAHISDDKNMISAFNEHDDIHTKTASEVFKVPIEEVTPLMRGNAKAVNFGIVYGIGDFSL
SQDLNITRKEAKQYIDAYLERYPNVKLYLENIVEEAIEKGYVSTILNRRRYIKEVKSSNK
IVKAAGERLAMNSPIQGSAADIIKLAMVNVHRKLKEDNFKSSIILQVHDELILNVHKDEL
EKIKALVKKEMEQVLELKVGLDVDINIGNNWYEAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaagattattaatattagatagtaatagtttattaaatagagctttttat
gcattacctgatcttatgactggagagggaattcatactaatgctatatatggttttgtt
aatatgcttttaaaaatgaaagaagagataaacccagattatatagttgcagcttttgat
agaaaggcacctacctttagacatgaagaatataaggactacaaagcaggtagaaaaaag
atgccagaggaacttgcacagcagtttcctatagtaaaagagcttttgtccgcattagcc
ataaatatattcgaaattgatgggtttgaagcagacgatctaataggaactttatctgta
tttgcagaggaaaaaggaatagaagtttacatagttacaggagataaagatgccctacaa
ttggctacagataatgtaaaagtagttataactaaaaagggtattacagaaaaagaaatt
tatgataaaaatagaatggtagaggagtttggagttactcctaaagaatttatagatgta
aaaggtcttatgggagacacatctgacaatatacctggagtacctggaataggtgaaaaa
actgcctttaagcttataaaagaatataaaagtatagaaacagtacttgaaaacatagag
aatataaaaggaaaaaaattaaaggaaaatttacatgaatatagagaacaggctatattt
agcaaaaaattagctactattatatgtaatgttcctatagatatgagtttagaagatata
aaatcaaaggaagaatatgatataaacaaagttagagaaatgtttgaaaggttagaattt
aagtctttaatgaataaagtaggtaaaagtgatgaggaagaaacggtagaagaggaagtt
tcttataaaaatatagtttctttagaagaatttaaagatctaaaaaataatataataaaa
tataaagaaaatgatttatatctgtattttgaattagaagatatagttttattttctaaa
tctagagtaaaaacattatatgctaattttaaagatgaagtttatagaatagactttgaa
atgcttataaaaaatactaaagaacaatttatagaagtatgtaaagaaatatttgaaagt
aaagaaattaaaaaaattacctatgatgcaaaaaatccaaggactatattaagaaagtta
ggaatagagtttaatggtataaaatttgatataaatttagctgcatatctaatagatcca
gtgaggaaagaatatgagatatctagtttagcttcagaatacttgtttaaaaatataaac
agagaagatgaatttttaaaaataaaagaagttaatataatgcctaatttatataaagtg
ctggaagaaaaaataaaagagcaagatatggaagaattgctatataaggtagaacaacct
cttacagaaacattatcagctatggagacagaaggttttaaagttgataaagatatactt
ttacagctagagaaaaaatttaaaggggaaatagaaagtactcagctagaaatatattca
atgtctgaagaagaatttaatataaattctcctaaacagttagggaaaatactctttgaa
aaattagatttacccgttataaagaaaacaaagacaggatattctactaacgcagaggta
ctggataaattaagagataaacatccaataatagataaaataacttattatagacagtta
acaaaaatatactctacttatatagaagggctaaaagctgctatagatgaggatggaaaa
atacattcaaattttaatcaaactgttacagctacaggaagattatctagtacagagcct
aatcttcaaaatatacctataaaatatgaaatgggaagagaaataagaaaggtatttatc
cctaatacaggggattctgtaatactttcagcggattattcacaaatagaattaagagta
ttagcacatatatctgatgataaaaatatgataagtgcctttaatgaacatgatgatatt
catactaaaactgcatcagaagtgtttaaagttccaatagaagaagtaacacctcttatg
agaggtaatgctaaagcagttaattttggtatagtttatggtataggagactttagctta
tctcaagatttaaatataactagaaaagaagcaaagcagtatatagatgcttatttggag
agatatcctaatgtaaaactttatttagaaaatatagtagaagaagctattgaaaaaggt
tatgtaagtactatattaaatagaagaagatacataaaagaggttaagtcctcaaataaa
atagttaaagctgcaggagaaaggctagctatgaatagtccaatacaaggaagtgcagcg
gatataataaaattagctatggtaaatgttcatagaaaattaaaagaagataattttaaa
agtagtataatattacaagtacatgatgaattaatattaaatgtccataaagatgaacta
gaaaaaatcaaagctttagtaaaaaaagaaatggaacaggttttagaattaaaagttggg
ttagacgtggatataaacataggtaataattggtatgaggcaaagtag
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