Clostridium botulinum A ATCC 19397: CLB_3242
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Entry
CLB_3242 CDS
T00574
Name
(GenBank) HDIG domain protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
cba
Clostridium botulinum A ATCC 19397
Brite
KEGG Orthology (KO) [BR:
cba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cba03019
]
CLB_3242
Messenger RNA biogenesis [BR:
cba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CLB_3242
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
Cas3_HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
ABS33162
LinkDB
All DBs
Position
complement(3391496..3392392)
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AA seq
298 aa
AA seq
DB search
MKGIYIKEAKHGEKIDSQFMILKKIYKDGDSIIAYMGDRTGDIKVKILDKKDVLDAGDVI
ECSFIFSNNSEILNFKKIDEFLLEDFLPTVDRPIEEIMNEIEQISKDEFKSKECIELNNY
FFKDQKFLDKFKKGIGGVSQHHNYIGGLAEHTLNVMYLAKMLCYRYNVKNRELTILSAKL
HDIGKTEELSTNGPFTYTLKGEMEGHIVIGAEMLQRAFNDNIEAYSEDFKQRVKACIIQH
HGKVEYGSPRSPKLEESYVVHYADYIDANMNKIAIVKKDVEENTWSQYDRRIEGKIYV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaatatacataaaagaggcaaagcatggtgaaaaaatagattctcaatttatg
atactaaagaaaatatataaagatggagatagcattatagcttatatgggagatagaact
ggagacatcaaagttaaaattttagataaaaaagacgttttagatgcaggggatgttata
gaatgtagttttatattttctaataacagtgaaatattaaattttaaaaaaatagatgaa
tttttattggaagattttttacctactgtagatagacctatagaagaaataatgaatgaa
atagaacaaatatcaaaagatgaattcaagagcaaagagtgtatagaactaaataattat
ttttttaaagatcaaaaatttttagataaatttaaaaaaggaataggcggggtaagtcag
catcataattatataggcggattagcagaacatacattgaatgtaatgtatttagctaaa
atgttatgttatagatataatgttaaaaatagggaattaactatattatcagccaaactt
catgatatagggaaaacagaggaactaagtactaatggtccctttacttacacactgaag
ggagagatggaaggacatatagttataggtgcagaaatgcttcagagagcattcaatgat
aatatagaagcatatagtgaagatttcaaacaaagagtaaaagcctgcataattcagcat
catggaaaagtagaatatggctctccaagatctccaaagttagaagaaagttatgtggtt
cattatgcggattatatagatgctaatatgaataaaatagctatagtaaaaaaggatgta
gaggaaaatacttggagtcaatatgacaggagaattgaaggaaagatttatgtatag
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