Serpentinimonas raichei: SRAA_0123
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Entry
SRAA_0123 CDS
T03614
Symbol
capD
Name
(GenBank) predicted nucleoside-diphosphate sugar epimerase
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
cbaa
Serpentinimonas raichei
Pathway
cbaa00541
Biosynthesis of various nucleotide sugars
cbaa00552
Teichoic acid biosynthesis
cbaa01100
Metabolic pathways
cbaa01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
cbaa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SRAA_0123 (capD)
00552 Teichoic acid biosynthesis
SRAA_0123 (capD)
Enzymes [BR:
cbaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
SRAA_0123 (capD)
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Paralog
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Motif
Pfam:
Polysacc_synt_2
Epimerase
RmlD_sub_bind
GDP_Man_Dehyd
C2185-like_N
3Beta_HSD
CoA_binding_3
adh_short
CoA_binding
PglD_N
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
BAO79977
UniProt:
A0A060NGE7
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All DBs
Position
complement(123741..125705)
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AA seq
654 aa
AA seq
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MNLLLHKLSSPILALPRPAKRAVALLVDLALCVLTVWLAFYLRLGELVPLSGAARWAVAG
AVALALPIFIVSGLYRAIFRYSGWPALLAVARAVAIYALLYAAIFTAIGVPGVPRTVGLI
QPLLLLLFVGASRALARHWLGEQYQGLLRRAQRPRVLIYGAGQSGRQLAAAMQHSPELQV
AGLLDDDERLHGHVLNGLPIYNPADLPVLARTLGIRDVLLAMPNIGRKRRNEVIEQMRAA
HVAVRTLPSMNDLAQGKVSLADVRELDLDDLLGREPVAPNHILLAKNIVGKVVLVTGAGG
SIGSELCRQIWAVRPAKLLLLEQSEFALYAIHHELEDKRTAGAAGADPGQIELLPLLASV
QDAARLHEIMQTWQPHTVYHAAAYKHVPLVEHNPAEGVKNNVLGTLRTAQAALQAGVSDF
VLVSTDKAVRPTNIMGASKRLAEMVLQALAAASAGAAGTAGTTRFAMVRFGNVLGSSGSV
VPKFRQQIRDGGPLTLTHPDITRYFMSIPEAAQLVIQAGAMAKGGEVFVLDMGQPVRIID
LARRMIELSGLSVQDDANPTGDIAIELSGLRPGEKLYEELLLGDNPSPTLHPRILKAQDD
FLPWAQLEGHLAELDLAMQHNDVPTIRLQLQHLVPGYTPNEAIVDWVYLEQQAG
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgttgctccataaactaagctcccccatcctcgccctgccccgccccgccaag
cgcgccgtggcgctgctggtggacttggcgctgtgcgtgctcacggtctggttggcgttt
tatttgcgcctgggcgagctggtgccgctcagcggggcggcgcggtgggcggtggcgggc
gcggtggcgctggcgctgccgatctttatcgtctcggggctttaccgggccattttccgc
tacagcggctggccagcgctgctggcggtggcgcgggcggtggcaatctatgcgctgctg
tatgcggcgatttttaccgccattggggtgccgggcgtgccgcgcaccgtgggcctgatc
cagccgctgctgctgctgctgtttgtgggcgcttcgcgcgcgctggcgcggcactggctg
ggcgagcagtaccagggcctgctgcgccgcgcccagcggccccgggtgctgatctacggt
gccgggcaaagcgggcgccaactggccgccgccatgcagcacagccccgagctgcaagtg
gccggtttgctcgacgacgacgagcgcctgcacggccacgtgctcaacgggctgcccatc
tacaacccggccgacctgccggtgctggcgcgcaccctaggcatacgcgatgtgctgctg
gccatgcccaacattgggcgcaagcggcgcaacgaggtgatcgaacaaatgcgtgccgcg
cacgtggcggtgcgcacgctgcccagcatgaacgacctggcgcagggcaaggtgagcctg
gccgatgtgcgcgagctcgacctcgacgacttgctcgggcgcgagccggtggcccccaac
cacattttgctggccaaaaacatcgtcggcaaggtggtgttggtcacgggggcgggtggc
tccattggcagcgaactgtgccgccagatctgggccgtgcggccggccaagctgctgctg
ctggagcagagcgaattcgccctctacgccattcaccacgagctcgaagacaagcgcaca
gcgggcgctgccggggccgacccggggcagatcgagctgctgccgctgctggcctcggtg
caagacgccgcgcgcctgcacgaaatcatgcaaacctggcagccgcacacggtctaccac
gccgccgcctacaagcacgtgccgctggtggagcacaacccggctgaaggggtgaagaac
aacgtgctgggcacgctgcgcacggcgcaggcggcgctgcaggcgggggtgagcgatttt
gtgctggtgagcaccgacaaagcggtgcgcccgaccaacatcatgggcgccagcaagcgc
ctggccgaaatggtgctgcaggcgctggcggcggcatcggcgggcgcggcgggcaccgcg
ggcacgacccgctttgccatggtgcgctttggcaacgtgctgggctcatcgggctcggtg
gtgcccaagtttcgccagcaaatccgcgacggcggcccgctcacgctcacgcaccccgac
atcacgcgctacttcatgagcatccccgaggcagcgcagctcgtcatccaggccggggcc
atggccaagggcggcgaggtgtttgtgctggacatggggcagccggtgcgcatcatcgac
ctggcgcggcgcatgatcgagctctcgggcctgagcgtacaagacgatgccaaccccacg
ggcgacatcgccatcgaactcagcggcctgcgcccgggcgagaagctgtacgaagaactg
ctgctgggcgacaaccccagccccacgctgcacccgcgcatcctcaaagcgcaggacgat
tttttgccctgggcgcagctcgaagggcacctggccgaactcgacttggccatgcagcac
aacgacgtgcccaccatccgcctgcaactgcagcacctggtgccgggctacaccccgaac
gaggcgattgtggactgggtttacctagagcagcaggcgggttga
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