Serpentinimonas raichei: SRAA_0221
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Entry
SRAA_0221 CDS
T03614
Name
(GenBank) isopropylmalate/homocitrate/citramalate synthase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
cbaa
Serpentinimonas raichei
Pathway
cbaa00280
Valine, leucine and isoleucine degradation
cbaa00650
Butanoate metabolism
cbaa00907
Pinene, camphor and geraniol degradation
cbaa01100
Metabolic pathways
cbaa01120
Microbial metabolism in diverse environments
cbaa04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cbaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SRAA_0221
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SRAA_0221
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SRAA_0221
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SRAA_0221
Enzymes [BR:
cbaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
SRAA_0221
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GFIT
Motif
Pfam:
HMGL-like
C2H2_ASCIZ_4th
Motif
Other DBs
NCBI-ProteinID:
BAO80075
UniProt:
A0A060NH98
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All DBs
Position
complement(233853..234770)
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AA seq
305 aa
AA seq
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MNTHSYPSHVHLVEVGPRDGLQNEAQPLPAAVKIELVQRLQAAGLRHIEVTSYVSPKWVP
QMADKHEVMRGIQRQPGVCYAVLTPNLKGFEAALADRPDEIVVFGSASEAFSQKNINCSV
AESIERFAPVVAAARAAGIFVRGAMSCTVGCPYEGEVAAQQVGRLAALMKGIGVQHVGVA
DTLGVGTPLKVQRAFEAALQHYELHQVSGHFHDTYGQALANTLAALQLGVAQFDASVAGL
GGCPYARGASGNVATEDLVYLLHGMGIDTGVDLEALIDAGAYISAALGRTSGSRVARALL
ARRAQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccactcctacccctcccacgtgcacctggtcgaagtcgggccgcgcgacggg
ctgcaaaacgaggcgcagccgctgcccgctgcggtcaagatcgagctggtgcagcgcttg
caggcggccggcttgcgccacatcgaagtcaccagctatgtgagccccaagtgggtgccg
cagatggccgacaagcacgaggtgatgcgcggcatccagcgccagcccggggtgtgctac
gccgtgctgacccccaacctcaagggcttcgaggccgcgctggcggaccggcccgacgag
atcgtggtgttcggctcggccagcgaggccttcagccagaagaacatcaattgcagcgtg
gccgagagcatcgagcgctttgcgccggtggtggcagcggcgcgtgcggcgggcattttc
gtgcgcggggccatgagctgcaccgtgggctgcccctacgagggcgaggtggcagcgcag
caggtgggccggctggcggccttgatgaagggcatcggggtgcagcacgtgggcgtggcc
gacaccctcggcgtgggcacgccgctcaaggtgcagcgcgccttcgaggccgccttgcag
cattacgaactgcaccaggtgagcggccacttccacgacacctacggccaggcgctggcc
aacacgctggcggcgctgcagttgggggtggcgcagttcgacgcctctgtcgccggactc
ggcggctgcccctacgcgcgcggggccagcggcaacgtggccaccgaagacctggtctat
ctgctgcacggaatggggatagacaccggggtcgatctggaggcgctgatcgacgccggt
gcctacatcagcgccgcgttgggccgcaccagcggctcgcgggtggcgcgggcgttgctg
gctagaagggcgcaatag
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