Serpentinimonas raichei: SRAA_0371
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Entry
SRAA_0371 CDS
T03614
Name
(GenBank) DNA polymerase I - 3'-5' exonuclease and polymerase domains
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cbaa
Serpentinimonas raichei
Pathway
cbaa03030
DNA replication
cbaa03410
Base excision repair
cbaa03420
Nucleotide excision repair
cbaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SRAA_0371
03410 Base excision repair
SRAA_0371
03420 Nucleotide excision repair
SRAA_0371
03440 Homologous recombination
SRAA_0371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbaa03032
]
SRAA_0371
03400 DNA repair and recombination proteins [BR:
cbaa03400
]
SRAA_0371
Enzymes [BR:
cbaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SRAA_0371
DNA replication proteins [BR:
cbaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SRAA_0371
DNA repair and recombination proteins [BR:
cbaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SRAA_0371
NER (nucleotide excision repair)
GGR (global genome repair) factors
SRAA_0371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BAO80225
UniProt:
A0A060NHK6
LinkDB
All DBs
Position
378591..381470
Genome browser
AA seq
959 aa
AA seq
DB search
MTQATLPSADHPATAPTLLLVDGSSYLYRAYHAMPDLRAVPGDPGSPATGALRGLINMAQ
ALLREHPAQSAAFVFDAPGPTFRDALYPAYKAQRSPMPDDLRAQIEPIHTVLRLLGWPVL
CVPGVEADDVLGTLAQQAAAAGMQVLISSGDKDLSQLVQPRITVIDTLSGKRRDVAGVQA
EFGVPPQQMVDYQCLVGDAVDNVPGVEKVGPKTAVKWLLEYGSLDAIVARAAQMPGAVGE
KLRQALDWLPTARQLLSIKTDCDLSAHLDPAAPLQQALRLQAPDQAALRDFYQRYGFKTL
VRSLEAVPGRAGVAQSGADQLGGMGLDAPGAAVAAFGLAEAAQAGQGAAEGADTAPTAPP
CQYETVLTWEALHAWLERLQAAPLVALDSETTGLDPLRAEIVGLSWSIEPGQAAYLPLAH
DYPGAPPQLPREQALECLRPWLENAAAPKLGQHIKYERHVFANHGIALRGLDHDTLLQSY
VLEAHLPHSLESLAERHLGLRGTSYAELCGKGAQQIPFAQVDIERASSYACEDSDFTLQV
HQRLWPRLQADAKLGAVYALEIDCSEVLYRIERHGVLIDAATLARQSHELGQRIVALEAQ
AHASAGQPFNLSSPKQLGEILYDRLGLPVLKKTATGARSTDEEVLEKLAEDYPLPAQILQ
HRSLSKLKNTYTDKLAALAHPRSGRVHTHYAQAVAVTGRLSSNEPNLQNIPIRTPEGRRV
REAFVAAPGHLIASADYSQIELRIMAHLSDDPALLRAFHTGQDVHRATAAEVFGLVPEQV
SSEQRRAAKAINFGLIYGMGSFGLAKALGIDNTAARNYIERYFERFAGVRRYMDATRAQA
KACGYVETVLGRRLYLPEINSPNGPRRAAAERAAINAPMQGTAADLIKLSMVAVQHALDA
QGRASRMIMQVHDELVFELPAAELDWLRSEVPRLMASVAQLKVPLLAEVGVGANWEQAH
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagccacactcccaagcgcagaccaccccgccacggcccccaccctgctgctg
gtcgatggctccagctacctgtaccgggcctaccacgccatgcccgatctgcgcgccgta
cccggcgaccccggcagcccggccaccggcgcgctgcgcggtctcatcaacatggcgcag
gcgctgctgcgcgagcacccggcccagagcgcggccttcgtgttcgacgcgcccggcccc
acctttcgcgatgcgctctaccccgcctacaaggcgcagcgcagccccatgcccgacgat
ttgcgcgcccagatcgagcccatccacacggtgctgcgcctgctcggctggccggtgctg
tgcgtgcccggtgtggaggccgacgacgtgctcggcaccctggcgcagcaagccgccgca
gccgggatgcaggtgctcatttccagcggcgacaaagacctgagccaactggtgcagccg
cgcatcacggtcatcgacacgctaagtggtaagcggcgcgacgtggccggggtgcaggcc
gaattcggcgtgccaccgcagcagatggtggactaccagtgcctggtgggcgacgcggtg
gacaatgtgcccggggtggagaaggtggggcccaaaaccgccgtcaagtggctgctcgaa
tacggctcgctcgacgccatcgtggcgcgagccgcgcagatgcccggtgccgtgggcgaa
aagctgcgccaggcgctggattggctgcccacggcgcgccagttgcttagcatcaagacc
gattgcgatttgagcgcgcacctagaccctgccgcgcccttgcagcaagcgctgcgcctg
caagcgccggatcaggcggcgctgcgcgatttttaccagcgctacggcttcaagacgctg
gtgcgatcgctggaagcggttccgggccgggccggggtcgcacagtccggggccgatcag
cttggtgggatggggcttgatgcaccaggcgctgctgtggccgccttcgggctggctgag
gcggcgcaggcagggcagggggccgcggagggcgccgataccgcacccaccgcgccacct
tgccagtacgagaccgtgctcacctgggaggcgctgcacgcctggctggagcgcctgcaa
gcggccccgctggtggcgctggacagcgaaaccaccgggctcgaccccctgcgcgccgaa
atcgtcggcctttcgtggagcatcgaaccgggccaagcggcctatctgccgctggcgcac
gactaccccggcgcgccgccgcaactgccgcgcgagcaggcgctggagtgcctgcgcccc
tggctggaaaacgcggccgcgcccaagctcggccagcacatcaaatacgagcgccacgtg
ttcgccaaccacggcatagccctgcgcgggctggaccatgacacgctgctgcaaagctac
gtgctcgaagcccacctgccgcacagcctggagagcctggccgagcgccatctaggcctg
cgcggcaccagctacgccgagctgtgcggcaagggcgcgcagcaaataccgtttgcacaa
gtggacatcgaacgcgccagcagctacgcctgcgaagacagcgatttcacgctgcaggtg
caccagcgcctgtggccgcggctgcaggccgatgccaaactgggcgcggtgtatgcgctc
gaaatcgattgctccgaggtgctgtaccgcatcgagcgccacggcgtgctgatcgacgcc
gccacgctggcgcgccagagccacgagctgggccagcgcatcgtggcgctggaggcgcag
gcccacgccagcgccggccagcccttcaacctcagcagccccaagcagttgggcgagatt
ttgtacgaccgcctcggcctgccggtgctcaagaaaaccgccaccggcgcgcgcagcacc
gacgaagaggtgctggaaaaattggccgaagactacccgctgccggcccaaatcttgcag
caccgctcgctctccaaactcaaaaacacctacaccgacaagctcgccgcgctggcgcac
ccgcgcagcgggcgcgtgcacacccactacgcgcaggccgtggccgtgaccgggcgcttg
tcgagcaacgagcccaatctgcaaaacatccccatccgcacccccgagggccggcgcgtg
cgcgaagccttcgtggccgcgcccgggcacctgatcgccagcgccgactattcgcagatc
gagctgcgcatcatggcgcacctgagcgacgacccggccctgctgcgcgccttccacacc
gggcaggacgtgcaccgcgccaccgccgccgaggtttttggactggtgcccgagcaggtg
agcagcgaacagcgccgcgccgccaaggcgatcaactttggcctgatctacggcatgggc
agctttggcctggccaaggcgctggggatagacaacacggcggcgcgcaactacatcgag
cgctacttcgagcgctttgccggtgtgcgccgctacatggacgccacccgcgcccaagcc
aaggcctgcggctacgtggagacggtgctgggccggcgcctgtatctgccagagatcaac
tcacccaacggcccgcgccgcgccgccgccgagcgcgccgccatcaacgccccgatgcag
ggcaccgccgccgacctgatcaagctcagcatggtggcggtgcagcatgcgctcgacgcc
caaggccgcgccagccgcatgatcatgcaggtgcacgacgaactggtattcgagctgccc
gccgctgaactagactggctgcgcagcgaagtgccgcgactgatggcctcggtggcgcag
ctcaaggtgccgctgctggccgaagtgggcgtgggcgccaactgggagcaggcgcattga
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