Serpentinimonas raichei: SRAA_0485
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Entry
SRAA_0485 CDS
T03614
Name
(GenBank) DNA-directed RNA polymerase specialized sigma subunit
KO
K02405
RNA polymerase sigma factor FliA
Organism
cbaa
Serpentinimonas raichei
Pathway
cbaa02020
Two-component system
cbaa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cbaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SRAA_0485
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SRAA_0485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbaa03021
]
SRAA_0485
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cbaa02035
]
SRAA_0485
Transcription machinery [BR:
cbaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SRAA_0485
Bacterial motility proteins [BR:
cbaa02035
]
Flagellar system
Flagellar assembly proteins
Stator
SRAA_0485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
HTH_23
GerE
HTH_28
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
BAO80339
UniProt:
A0A060NN82
LinkDB
All DBs
Position
497581..498297
Genome browser
AA seq
238 aa
AA seq
DB search
MYTAKGTLDRDAQLQRYSPLVVRLAHHLMARLPASVQIDDLIQVGMIGLNEALSRFEPTQ
GVQFETFASQRIRGAMLDELRDGDWLSRSSRKQQKDIEAAVQRLEQRLQRVPRESEIAHE
LGLSLAEYQESLTRVRGTQLVYLEDLAGAGEDDQFLDRYLPADDSANPQTMLSDQRMRTA
LIEGINKLPEREQYVMSMYYEHDMNLKEIAAVLGVTESRVSQLHSQSIARLRARLREH
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgccaaaggtacgcttgaccgcgatgcccaactccaacgatacagccccctg
gtggtccgcttggcgcatcatctgatggcccggctgcccgccagcgtccaaatcgacgac
ctgatccaagtcggcatgatcggcctcaatgaagccttgtcgcgcttcgagcccacgcag
ggggtgcagttcgagacctttgccagccagcgcatacgcggggccatgctcgatgagctg
cgcgacggcgactggctctcgcgcagctcgcgcaagcagcaaaaagacatcgaggcggcg
gtgcagcggctggagcagcggctgcagcgggtgccgcgcgaatccgaaatcgcgcacgag
ctgggcttgtcgcttgccgagtaccaagagagcctgacgcgggtgcgcggcacccaactg
gtgtacctcgaagacctggccggtgccggtgaggacgaccagtttttagaccgttacctg
cccgccgacgacagcgccaacccacaaaccatgctgagcgaccagcgcatgcgcacggcg
ctgatcgagggcatcaacaagctgcccgagcgcgagcaatacgtgatgagcatgtactac
gagcacgacatgaacctcaaagagattgcggccgtgctgggggtgaccgaatcgcgcgtg
agccagttgcacagccaatcgattgcccggctgcgggcgcggctgcgcgaacactaa
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