Serpentinimonas raichei: SRAA_0502
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Entry
SRAA_0502 CDS
T03614
Symbol
groEL
Name
(GenBank) chaperonin GroEL, HSP60 family
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cbaa
Serpentinimonas raichei
Pathway
cbaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SRAA_0502 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbaa03019
]
SRAA_0502 (groEL)
03110 Chaperones and folding catalysts [BR:
cbaa03110
]
SRAA_0502 (groEL)
03029 Mitochondrial biogenesis [BR:
cbaa03029
]
SRAA_0502 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbaa04147
]
SRAA_0502 (groEL)
Enzymes [BR:
cbaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SRAA_0502 (groEL)
Messenger RNA biogenesis [BR:
cbaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SRAA_0502 (groEL)
Chaperones and folding catalysts [BR:
cbaa03110
]
Heat shock proteins
HSP60 / Chaperonin
SRAA_0502 (groEL)
Mitochondrial biogenesis [BR:
cbaa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SRAA_0502 (groEL)
Exosome [BR:
cbaa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SRAA_0502 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SRAA_0502 (groEL)
Exosomal proteins of breast cancer cells
SRAA_0502 (groEL)
Exosomal proteins of colorectal cancer cells
SRAA_0502 (groEL)
Exosomal proteins of bladder cancer cells
SRAA_0502 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAO80356
UniProt:
A0A060NFU2
LinkDB
All DBs
Position
complement(511618..513264)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGI
DRAVTALVEELKRSSKPTTTSKEVAQVGAISANADASIGDIIAKAMDKVGKEGVITVEDG
KSLDNELDIVEGMQFDRGYLSPYFINNPEKQAALLDNPFVLLFDKKISNIRDLLPTLEAV
AKAGRPLLIVAEDVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKV
IAEEVGLTLEKVTLADLGQAKRIEVAKENTIIIDGAGSEDDIQARVKQIRIQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL
RARQAISSIKGDNADQEAGIKIVLRAVEEPIRIIVSNAGGEPSVVVNAVLAGKGNYGFNA
ANDSYGDMIEMGILDPTKVTRMALQNAASVASLMLTTEAMVAEAPKDDAPAMPGGGMGGM
GGMGGMDM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtagttttcggcggcgaagcccgcgctcgcatggtcgagggtgtg
aacatcctggccaacgccgtgaaagtgacgctgggccccaaaggccgcaacgtggtgctc
gagcgcagcttcggcgcccccaccgtgaccaaagacggcgtgtcggtggccaaagagatc
gagctcaaagacaagctgcaaaacatgggcgcgcagatggtcaaggaagtcgcttccaag
accagcgacaacgccggtgacggcaccaccaccgccaccgtgctggcccaagccatcgtg
cgcgaaggcatgaagtacgtggccgcgggcatgaacccgatggacctcaagcgtggcatc
gaccgcgccgtgaccgccctggtcgaagagctgaaacgctcctccaagcccaccaccacc
agcaaggaagtggcgcaagtgggtgcgatttcggccaacgccgacgccagcattggcgac
atcatcgccaaagccatggacaaagtgggcaaagaaggcgtgatcacggttgaagacggc
aagagcctggacaacgagctcgacatcgtcgaaggcatgcagtttgaccgcggctacctg
tcgccctacttcatcaacaaccccgaaaaacaagcggccctgctcgacaacccgttcgtg
ctgctgtttgacaagaaaatcagcaacatccgcgacctgctgccgacgctcgaagcggtg
gccaaggccggccgtccgctgctgatcgtggccgaagacgtggaaggcgaggcgctggcc
acgctggtggtcaacaccatccgcggcatcctgaaagtggtggcggtgaaagccccgggc
tttggcgaccgccgcaaagccatgctggaagacatcgccatcctgaccggtggcaaagtg
atcgccgaagaagtgggcctgacgctggagaaggtcacgttggccgatctgggccaagcc
aagcgcatcgaagtggccaaggaaaacaccatcatcatcgacggtgccggctccgaagac
gacatccaggcgcgtgtcaagcaaatccgcatccagatcgaggaagccacctcggactac
gacaaagagaagctgcaagagcgcgtggccaagctggccggtggcgtggcggtgatcaag
gtcggcgcagccaccgaagtcgagatgaaagagaagaaagcccgcgtcgaagacgcgctg
cacgcgacccgtgcggctgtggaagaaggcatcgtggccggcggcggcgtggcgctgctg
cgtgcgcgccaggccatcagctcgatcaagggcgacaacgccgaccaagaagccggcatc
aagatcgtgctgcgcgcggtcgaagagccgattcgcatcatcgtgtccaacgccggtggc
gagccgagcgtggtggtgaatgcggtgctggccggcaagggcaactacggcttcaacgcc
gccaacgacagctacggcgacatgatcgagatgggcattctggacccgaccaaggtgacg
cgcatggcgctgcaaaacgccgcctcggtggcctcgctgatgctcaccaccgaagccatg
gtggccgaggcccccaaagacgacgccccagcaatgccgggcggcggcatgggcggcatg
ggtggtatgggcggcatggatatgtga
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