Serpentinimonas raichei: SRAA_0565
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Entry
SRAA_0565 CDS
T03614
Symbol
truB
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cbaa
Serpentinimonas raichei
Brite
KEGG Orthology (KO) [BR:
cbaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbaa03016
]
SRAA_0565 (truB)
Enzymes [BR:
cbaa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SRAA_0565 (truB)
Transfer RNA biogenesis [BR:
cbaa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SRAA_0565 (truB)
Prokaryotic type
SRAA_0565 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BAO80419
UniProt:
A0A060NND6
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All DBs
Position
569316..570266
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AA seq
316 aa
AA seq
DB search
MHGVLLLDKALGLSSNQALQRAKWLLRADKAGHTGTLDPLASGLLPLCFGAATKFSQLQL
DADKVYAATLRLGVRTSSGDAEGEVLERRPVACTPGQVQQVLARFLGPISQVPPMHSALK
HQGRALYEYARAGLEVERAPRSVTIHALELLALHLHSPEPTLGLRVRCSKGTYIRTLAED
IGAALGCGAHLAALRRERSGGLVLERSLTLEQLEALPEGERLQALLPVEALLDGHERVTL
DGDNAARFLTGLRRRGPWPQAERVAVYAEQDAQHALGQGPQPAPLLGSAHIQGGELIPGR
LLSPIEIQQIQLQNQP
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
gtgcacggggtgctgctgctggacaaagcgctgggcctgtccagcaaccaggcgctgcag
cgcgccaagtggctgttgcgtgccgacaaagccggccacaccggcaccctggacccgctc
gccagcggcctgctgccgctgtgctttggtgcggccaccaagttcagccaattgcagctc
gatgccgacaaggtctatgcggccacgctgcgtctaggtgtgcgcacgagcagcggcgac
gccgagggcgaggtgctggagcgccgccccgtggcctgcacacccgggcaggtgcagcag
gtgctggcgcgcttcctggggccgatcagccaagtgccgcccatgcacagcgcgctcaag
caccaaggccgggccctgtacgaatacgcccgcgccgggctggaagtggagcgcgcgccg
cgcagcgtcaccatccacgcgctggagctgttggcgctccacctacacagccccgagccc
acgctgggcctgcgcgtgcgctgcagcaaaggcacttacatccgcaccctggccgaggac
atcggggccgcgctgggttgcggcgcgcatctggcggccttgcggcgcgagcgcagcggc
ggcctggtgctggagcgcagcctgacgctggagcagctcgaagccttgcccgagggcgag
cgtctgcaggccctgctgcccgtggaggcgctgctggacggacacgagcgcgtcacgctc
gatggcgataatgcagcgcgcttcctcaccggtttgcgtcggcgcggaccgtggccgcag
gccgaacgcgtggccgtgtatgccgaacaggacgcgcagcacgctttaggccaaggccca
caacccgccccgctgctcggcagcgcccacatccagggcggcgaactcatacccgggcgc
ttgttgagcccgatcgaaatccaacaaatccaactgcaaaaccagccatga
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