Serpentinimonas raichei: SRAA_0574
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Entry
SRAA_0574 CDS
T03614
Name
(GenBank) DNA polymerase III, alpha subunit, gram-positive type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cbaa
Serpentinimonas raichei
Pathway
cbaa03030
DNA replication
cbaa03430
Mismatch repair
cbaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SRAA_0574
03430 Mismatch repair
SRAA_0574
03440 Homologous recombination
SRAA_0574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbaa03032
]
SRAA_0574
03400 DNA repair and recombination proteins [BR:
cbaa03400
]
SRAA_0574
Enzymes [BR:
cbaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SRAA_0574
DNA replication proteins [BR:
cbaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SRAA_0574
DNA repair and recombination proteins [BR:
cbaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SRAA_0574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DUF2383
PAS_4
DEDDh_C
DNA_pol_A_exo1
Vps54_N
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
BAO80428
UniProt:
A0A060NLP4
LinkDB
All DBs
Position
581018..583249
Genome browser
AA seq
743 aa
AA seq
DB search
MARHQPTDKRLLWLLAVAALVSIVWLLFTLWLIAATLTPPDRATVWALVGPSLLLVSLTW
GAGMGAIAWGLKRWFGHWVTPSVQLAEEAQVLLRTDVVRELRPKGNVETKELAKLFNQLV
AQREELRHQMQDKVRAAARDIEQEKSRLAALMSELTQSVVVCNLDGRILLYNNRARTQFR
ALSQSPRLADGAELIGLGRSIYTVFDRKLVAHALESVQQRLQRGVAQPTAQFVTSTRAGQ
LLRVQMTPVRSVAEPDAAPVLGAALEPATQAPPLQLAGFVLMLDNITREFEAEAVRERLV
LGLTEGSRAALANMRAAIEMLDYPDLEPALRERFLAVVRDEVQALSERVQRSSSQAAEVF
QSRWPLEDMLGTDLLSAAGRRIEETLGLALNQSEADPNLWLRIESFSILQALLFLSARLR
DEFAIRHVSLRLRPSGQGVDKAELDLIWSGATLSTETVMSWEIDPMRIGSEASALTVREV
VDRHGGAFWLERDRASNQAWFRFLLPAATAQEQLDNATFVHHPSRPEYYDFDLFRVSPRS
QALDEVPLADLSFTVFDTETTGLNPAEGDEIIQIGAVRVLNGKLLRQEVFDQLVDPKREI
PPESIPIHGITPEMVQGQPGILEVLPALHAFAADTVLVAHNAAFDMRFLQLKERQTGLAF
EQPVLDTLLLSAVVHPGQDSHRLEAIAERFNVTVIGRHTALGDAMVTAEVFVRLLPLLAE
KGIHTLGQARGAAQRTYFARIQY
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccaccaacccaccgacaaacggctgctctggctgctggccgtggcggcgctg
gtctccatcgtctggctgctgttcacgctctggctcatcgccgccacgctcacgccgccc
gatcgcgccaccgtctgggccttggtggggcccagcctgctgctggtgagcttaacctgg
ggtgccggcatgggggcgattgcctggggcctgaaacgctggttcggtcactgggtcacg
ccctcggtgcaactggcggaggaagcgcaggtgctgctgcgcaccgacgtggtgcgcgag
ctgcgccccaaaggcaacgtcgagaccaaggagctggccaagctgttcaaccagttggtg
gcgcagcgcgaggagctgcggcaccagatgcaagacaaggtgcgcgccgccgcgcgcgac
atcgagcaagaaaaatcgcgcctggcggcgctgatgtccgagctcacccaaagcgtggtg
gtgtgcaacctcgacggccgcatcctgctctacaacaaccgcgcccggacgcagtttcgc
gccctctcgcaaagcccgcgcttggccgatggggccgagctgatcggactcgggcgctcg
atctacaccgtgttcgaccgcaaactggtggcgcacgcactcgagagcgtgcagcagcgc
ctgcagcgcggggtggcgcaacccacggcgcagtttgtcaccagcacccgcgccgggcag
ttgctgcgcgtgcagatgacgccggtgcgcagcgtggccgaacccgatgccgcgccggtc
ttgggcgcggccttggagcccgccacccaagccccacccctgcaactggccggcttcgtg
ctcatgctcgacaacatcacgcgcgagttcgaggccgaggcggtgcgcgagcgcctggtg
ctgggcctgaccgaaggcagccgggcggcgctggccaatatgcgtgccgccatcgagatg
ctcgactaccccgacctcgaaccggccctgcgcgagcgctttctggccgtggtgcgcgac
gaggtgcaggccttaagcgagcgcgtgcagcgcagcagcagccaagccgccgaggtgttt
caaagccgctggccgctggaagacatgctcggcaccgacttgctcagcgccgccgggcgg
cgcatcgaagaaacgctgggcctggcgctcaaccagagcgaggccgacccgaatctgtgg
ctgcgcatcgagagcttttcgattttgcaggcgctgctgtttttgagtgcgcgcctgcgc
gacgaattcgccatccgccacgtcagcctgcgcctgcgcccctcgggccaaggggtcgac
aaggccgagctggacctgatctggagcggcgccacgctcagcaccgagaccgtgatgagc
tgggagatcgaccccatgcgcatcggcagcgaggccagcgccttgacggtgcgcgaggtg
gtggaccgccacggcggcgccttctggctggagcgggatcgggccagcaaccaggcttgg
tttcgcttcctgctgccggccgccaccgcgcaagagcagctcgacaacgccaccttcgtg
caccacccaagccgcccggagtattacgatttcgacctgtttcgcgtcagtccgcgcagc
caggcgctcgacgaggtgccgctggccgatctgtccttcactgtgttcgacaccgaaacc
accggcctcaatccggccgagggcgacgagatcatccagatcggcgccgtgcgcgtgctc
aacggcaagctgctcaggcaagaggtgttcgaccagttggtcgatcccaagcgcgagatc
ccgcccgagtcgatccctatccacggcatcacgcccgagatggtgcaaggccagcccggc
atcctggaggtgttgcccgccttgcacgcctttgccgccgacaccgtgctggtggcgcac
aacgccgccttcgacatgcgttttttgcaactcaaggagcggcaaaccgggctggcgttc
gagcagccagtgctcgacacgctgctgctgtcggcggtggtgcaccccggacaagattcg
caccggctcgaagccattgccgaacgcttcaacgtcaccgtaatcggccgccacaccgcc
ttgggcgacgccatggtcaccgccgaggtgttcgtgcgcctgttgcccttgttggccgaa
aaaggcatccacaccctgggccaggcgcggggggcggcgcagcgcacctactttgcgcgc
atccagtattga
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