Serpentinimonas raichei: SRAA_0741
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Entry
SRAA_0741 CDS
T03614
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cbaa
Serpentinimonas raichei
Pathway
cbaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SRAA_0741 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbaa03019
]
SRAA_0741 (pnp)
03016 Transfer RNA biogenesis [BR:
cbaa03016
]
SRAA_0741 (pnp)
Enzymes [BR:
cbaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SRAA_0741 (pnp)
Messenger RNA biogenesis [BR:
cbaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SRAA_0741 (pnp)
Transfer RNA biogenesis [BR:
cbaa03016
]
Prokaryotic type
tRNA degradation factors
SRAA_0741 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
DNA_pol3_a_NI
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
BAO80595
UniProt:
A0A060NI77
LinkDB
All DBs
Position
780317..782461
Genome browser
AA seq
714 aa
AA seq
DB search
MGLFNKVSKSFQWGRHTVRLETGEIARQSSGAVLLDMDGTVVLATVVARTEAKSGQDFFP
LTVDYLEKSYAAGKIPGSFFKREGRPSEFETLTSRLIDRPIRPLFPEGFFNEVQVVVHTL
SLNPEVDADIAALIATSAALSISGIPFNGPIGAARVGYVNGQYLLNPGQTERANSQLDLV
VAGTQAAVLMVESEAQQLSEEVLLGAVVFGHEQGNIAIAAINELVRDAGKPEWDWQPPAR
NEPLIARVEALAREALVAAYQIRNKQARTQACRQAYAATMAGLKAEGVEFDSVKVEELLF
NIEAGIVRGQILAGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVIATLGT
ERDAQRVDALAGDFEDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVAALPPK
DEFPYTLRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKDGNRFAVL
TDILGDEDHLGDMDFKVAGTTGGITALQMDIKIQGITKEIMQVALAQAKEARLHILGEMQ
AAMGSANTEISDFAPRLYTMKINPEKIRDVIGKGGATIRALTEETGTQIDIAEDGTITIA
SNESAKAEEAKRRIEAITAEVEIGKVYEGAITKILDFGALVNLLPGKDGLLHISQIAHQR
VEKVTDFLKEGQVVKVKVLETDEKGRIKLSMKALLDRDEVQSAPAQQPQAAQDD
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgtttaacaaagtcagcaaaagcttccaatggggccgccacacggtgcgcctt
gaaaccggcgagatcgcacgccaatccagcggcgccgtgctgctcgatatggacggcacc
gtggtgctggccaccgtggtcgcccgaaccgaggccaagtccgggcaggactttttcccc
ctcaccgtcgattacctcgaaaaatcttacgctgcgggcaaaattccgggtagcttcttc
aagcgcgaaggccgcccaagcgagttcgagaccctcaccagccgcctgatcgaccgcccg
atccgcccgctctttcccgaaggcttcttcaatgaagtgcaggtggtggtgcacacgctc
tcgctcaaccccgaggtcgatgccgacatcgcggccctgatcgccaccagcgccgccttg
tcgatcagcggcatccccttcaacggccccatcggcgcagcccgtgtcggctacgtcaac
ggccagtacctgctcaaccccggccagaccgagcgcgccaacagccagctcgatctggtg
gtggcgggcacccaagctgcggtgctgatggtcgagagcgaggcccagcaactgtcggaa
gaagtgctgctcggcgctgtggtctttggccatgagcaaggcaacatcgccattgccgcc
atcaacgaattggtgcgcgatgccggcaagcccgaatgggactggcagccgccggcgcgc
aacgagccgctgatcgcgcgcgtcgaggcgctggcccgcgaagcgctggtggcggcctac
cagatccgcaacaaacaggcgcgcacccaagcctgccgccaggcctacgccgccaccatg
gccgggctcaaggccgagggcgtcgagttcgactcggtcaaggtcgaagagctgctgttc
aacatcgaagccggcatcgtgcgcggccagattctggccggcgagccgcgcatcgacggc
cgcgacacgcgcaccgtgcgcccgatcgaaatccgcaccggcgttctgccacgcacccac
ggctcggcgctgttcacacgcggcgaaacgcaagcgctggtgatcgccaccctgggcacc
gagcgcgatgcgcagcgcgtcgatgcgctggcgggcgatttcgaagaccgcttcatgctg
cactacaacatgccgccctttgccaccggcgaaaccggccgcgtcggcagccccaagcgg
cgtgaaatcggccacggccggctggccaagcgcgctctggtggctgcgctgccacccaaa
gacgagttcccctacaccctgcgcgtggtgagtgaaatcaccgaatccaacggctcctcg
tccatggcctcggtctgcggcggctgcctggcgctgatggatgcgggcgtgcccatgaag
gcgcacgtggccggcatcgccatgggcctgatcaaagacggcaaccgctttgccgtgctg
accgacattctgggtgacgaagaccacctgggcgatatggatttcaaggtcgcgggcacc
accggcggcatcacggccttgcagatggacatcaaaatccagggcatcaccaaagaaatc
atgcaagtggcgctggcgcaggccaaagaggcgcggctgcacatcttgggcgagatgcag
gcggcgatgggttcagccaacaccgaaatcagcgacttcgccccgcgcctctacaccatg
aagatcaacccggagaaaatccgcgacgtgatcggcaaggggggtgccaccatccgtgcc
ctgaccgaagaaaccggcacccagatcgacatcgccgaagacggcaccatcaccatcgcc
agcaacgaatcggccaaggccgaagaggccaagcggcgcatcgaggccatcacggccgaa
gtcgaaatcggcaaggtctatgaaggcgcgatcaccaaaatcctcgatttcggtgccttg
gtcaacctgctgccaggcaaagacggcctgctgcacatcagccagatcgcgcaccagcgc
gtcgaaaaagtcaccgacttcctcaaagagggccaagtggtcaaagtcaaggtgctggaa
accgacgaaaaaggccgcatcaagctgtcgatgaaggcgctgctggaccgcgacgaggtg
cagtcggccccggcgcagcagccgcaagcggcgcaagatgactga
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