Serpentinimonas raichei: SRAA_1085
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Entry
SRAA_1085 CDS
T03614
Name
(GenBank) pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component, and related enzymes
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
cbaa
Serpentinimonas raichei
Pathway
cbaa00010
Glycolysis / Gluconeogenesis
cbaa00020
Citrate cycle (TCA cycle)
cbaa00260
Glycine, serine and threonine metabolism
cbaa00280
Valine, leucine and isoleucine degradation
cbaa00310
Lysine degradation
cbaa00380
Tryptophan metabolism
cbaa00620
Pyruvate metabolism
cbaa00630
Glyoxylate and dicarboxylate metabolism
cbaa00640
Propanoate metabolism
cbaa00670
One carbon pool by folate
cbaa00785
Lipoic acid metabolism
cbaa01100
Metabolic pathways
cbaa01110
Biosynthesis of secondary metabolites
cbaa01120
Microbial metabolism in diverse environments
cbaa01200
Carbon metabolism
cbaa01210
2-Oxocarboxylic acid metabolism
cbaa01240
Biosynthesis of cofactors
Module
cbaa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cbaa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cbaa_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
cbaa_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
cbaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SRAA_1085
00020 Citrate cycle (TCA cycle)
SRAA_1085
00620 Pyruvate metabolism
SRAA_1085
00630 Glyoxylate and dicarboxylate metabolism
SRAA_1085
00640 Propanoate metabolism
SRAA_1085
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SRAA_1085
00280 Valine, leucine and isoleucine degradation
SRAA_1085
00310 Lysine degradation
SRAA_1085
00380 Tryptophan metabolism
SRAA_1085
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SRAA_1085
00670 One carbon pool by folate
SRAA_1085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbaa04147
]
SRAA_1085
Enzymes [BR:
cbaa01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SRAA_1085
Exosome [BR:
cbaa04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SRAA_1085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
GIDA
NAD_binding_8
Biotin_lipoyl_2
FAD_binding_2
FAD_binding_3
Pyr_redox_3
Thi4
NQRA_N
DAO
HI0933_like
AlaDh_PNT_C
GCV_H
RnfC_N
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
BAO80939
UniProt:
A0A060NPV6
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All DBs
Position
complement(1150455..1152290)
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AA seq
611 aa
AA seq
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MAIMDIKVPDIGDFDEVAVIELLVKPGDAVRAEQSLITVESDKASMEIPSSHAGVVKALK
VKLGDKVKQGSVLLALEVEGEAATAPAAPAAAAATVVSPAAPAPAPTQATHAPVASPQAA
STPFDFDLLVLGSGPGGYSAAFRAADLGLKVVLVERYAELGGVCLNVGCIPSKALLHVAA
VLEEASHLGALGVEFGPPTLDLGKLRTHKTKVIGKLTGGLAAMAKMRKVTVLRGYGAFVG
PHQVQVEATHGSGQEQTGSKQIVSFKACIIAVGSQAVRLPFMPDDPRVVDSTGALALPGV
PKNMLIIGGGIIGLEMGTVYSALGARLDVVEMQDGLMPGADRDLVKVWEKMNKGRFDRIL
LKTKTVAATATAEGIRVQFEGLDGSTSEGRYDLVLQAVGRTPNGHKIAAEQAGVAVSERG
FIGVDAQMRSNVPHIFAIGDVVGQPMLAHKAVHEAHVAAEVVAGELLGRPELAAAAFDAR
VIPSVAYTDPELAWVGLTEEQAKAQGIAVRKGLFPWSASGRALANGCEQGFTKLLFDDRP
EAGGHGRILGGGIVGRHAGDLIGEVALAIEMGADAVDIGKTIHPHPTLGESIGLAAEAAH
GSCTDLPPQRG
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcatggatatcaaggtgcccgacattggcgacttcgacgaggtggcggtgatc
gagctgctggtgaaaccgggggatgcggtccgggccgagcaaagcctgatcacggtcgag
tccgacaaggcttcgatggagatcccttcctcgcacgccggcgtggtcaaagcgctcaag
gtcaagctgggggacaaggtgaagcaaggctcggtgctgctggcgttggaggtcgagggc
gaggcggcaacagccccagcggctcctgccgctgccgctgccacagtggtttctcctgca
gccccggctcctgcccccacccaggccactcatgcccctgtggcgtccccacaagcggcc
agcaccccgttcgacttcgacctgctggtgctgggctcgggcccgggtggttactcggct
gcctttcgcgctgccgatctgggcctgaaagtcgtgctggtcgagcgctacgccgaactg
ggtggcgtgtgcctgaacgtgggctgcatcccctccaaggccttgctgcacgtggcggcg
gtgctggaagaggccagccacttgggcgcgctgggggtcgagttcggcccgcccacgctc
gatttaggcaagctgcgcacgcacaaaaccaaggtgatcggcaagctcaccggcggcttg
gcggccatggcaaaaatgcgcaaggtcacggtgctgcgcggctacggtgccttcgtcggc
ccgcaccaggtgcaagtcgaagccacgcacggcagcggccaggagcagaccggcagcaag
cagatcgtgtccttcaaggcctgcatcatcgccgtgggctcgcaggcggtgcgcctgccc
tttatgcccgacgacccgcgcgtggtcgactccactggcgcgctggcgctgccgggcgtg
cccaagaacatgctgatcatcggcggcggcatcatcgggctggagatgggcacggtgtat
tcagccttgggcgcaaggctggacgtggtcgagatgcaagacggcctgatgccgggggcc
gaccgcgatctggtcaaggtctgggaaaagatgaacaagggccgcttcgaccgcatcttg
ctgaaaaccaaaaccgtggcggccacggccacggccgagggcattcgggtgcagttcgag
ggcttggatggcagcaccagcgaaggccgttacgacctggtgctgcaagccgtgggccgc
acgcccaacggccacaagattgctgccgagcaggccggcgtggccgtgagcgagcgcggc
ttcatcggcgtcgatgcccagatgcgcagcaacgtgccgcacatttttgccattggcgac
gtggtcggccagcccatgctggcgcacaaggcggtgcacgaggcgcacgtggcggccgaa
gtggtggcgggcgagctgctgggccgccccgagctggccgcggccgcgttcgacgcccgc
gtgatccccagcgtggcctacaccgaccccgaactggcttgggtgggcctgaccgaagag
caggccaaggcgcaagggatagcggtgcgcaagggcctgtttccgtggagcgccagtggg
cgcgcgctggccaatggctgcgagcagggctttaccaagctgctgttcgacgaccgcccc
gaagccggcggccacggccgcattctgggtggcggcatcgtgggccgccacgccggcgac
ctgatcggcgaagtcgcgctggcgatcgaaatgggggccgacgcggtggatatcggcaaa
accatccacccgcacccgaccttgggcgaatcgatcggactggcggccgaggccgcgcac
ggctcctgcaccgatctgccgccgcagcgcggctag
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