Serpentinimonas raichei: SRAA_1406
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Entry
SRAA_1406 CDS
T03614
Symbol
rumA
Name
(GenBank) SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cbaa
Serpentinimonas raichei
Brite
KEGG Orthology (KO) [BR:
cbaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbaa03009
]
SRAA_1406 (rumA)
Enzymes [BR:
cbaa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
SRAA_1406 (rumA)
Ribosome biogenesis [BR:
cbaa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SRAA_1406 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
RrnaAD
TRAM
TRM5-TYW2_MTfase
Methyltransf_23
MTS
Motif
Other DBs
NCBI-ProteinID:
BAO81260
UniProt:
A0A060NJF0
LinkDB
All DBs
Position
complement(1513863..1515416)
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AA seq
517 aa
AA seq
DB search
MACAETSTACPEPVNASDCNEPAACPETVALPCASLPPAGWLRVDAMDLDAQGVARRPDG
KVVFIDGALPTEWVSAKTRRSKNQWEQADLSAIHRESALRVQPRCPHFGLHAGACGGCKM
QHLDTAAQVAVKQRVLEDNLWHLAKVRPDSILPAIAGPAWGYRYRARLSVRYVHKKGQVL
IGFHERKSRYVADMRVCPVLPPHVSALLLPLRELFGSMDARETCPQIELAVGDAVTALVL
RHLQPLSAADCARLRAFAHSHGSATAPIQWWLQPKGPDTAHLLDADAGQPCLDYALSEFG
LRMPFRPTDFTQVNPHINRVLVGRAVRLLAPQAHERVIDWFCGLGNFTLPLATRARAVLG
IEGSASLVARAQANWAENQGQRGGLAPTRFEVRNLFEITPQQLCADGVAEKWLVDPPREG
AFALVKALADWQQAQGGQGDQEGQEGVPQAATAGATTDWRPPQRIVYVSCNPSTLARDAG
LLVHQAGYRCAAAGVVNMFAHTAHVESMAVFERADAG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcgctgaaacctcaacggcctgccccgagcctgtcaacgcttccgattgcaac
gagccagctgcctgtcctgaaacggttgctctgccgtgcgccagcctgccacctgcgggc
tggctgcgcgtcgatgccatggacctcgatgcccaaggggtggcgcggcgccccgacggc
aaggtggtgttcattgatggcgccttgcccaccgaatgggtcagcgcgaaaacgcggcgc
agcaaaaaccagtgggaacaggccgacctgagcgcgatacaccgcgagtcggccttgcgc
gtgcaaccgcgttgcccacactttggcctgcacgccggggcttgcggcggctgcaagatg
cagcatttggatacggcggcccaggtggcggtcaagcagcgcgtgctggaagacaacctc
tggcacttggccaaggtccgccctgactcgatcctgcctgccattgcaggcccggcatgg
ggctaccgctaccgggcccggctgtcggtgcgctacgtgcacaaaaaagggcaggtgctg
atcggctttcacgaacgcaagagccgctatgtggccgatatgcgcgtctgtccggtgttg
ccgccccatgtgagcgcgctgctgctgccgctgcgcgagttgtttggcagcatggacgcg
cgcgagacctgcccgcagatcgagctggcggtgggcgatgcggtgacggcgctggtgctg
cgccacttgcaacccctgagcgcagccgattgcgcccgcttgcgcgcctttgcacacagc
catggcagtgccacggccccgatccagtggtggctgcagcccaaaggccccgacaccgcg
cacttgctggatgcggacgctgggcagccctgcctagactatgccctgagcgagtttggg
ctgcgcatgccctttaggccaaccgacttcacccaagtcaacccacacatcaaccgggtg
ctggtcgggcgtgcggtgcgactgctggcgccgcaagcccacgagcgcgtgatcgactgg
ttctgcggcctaggcaacttcaccctgcctttggcaacccgggcgcgcgcggtgctgggc
atcgagggcagcgcctccttggtggcgcgggcccaggccaactgggccgagaaccaaggc
cagcgcggcggcttggcgccgacccggttcgaggtgcgcaacctgttcgagatcacgccg
cagcagttgtgcgccgacggagtggccgaaaaatggctggtggacccgccgcgtgagggc
gcttttgcgctggtcaaggcgctggccgattggcagcaggcccaaggtggccaaggcgac
caagagggccaagagggcgtcccccaagccgcaacggctggcgcgacgaccgattggcgc
cccccgcagcgcatcgtttacgtgagttgcaacccgtccacgttggcgcgcgacgccggg
ctgttggtgcaccaggccggctaccgctgcgcggcggcgggggtggtgaacatgtttgcg
cacacggcccacgtggagagcatggcggtgttcgagcgggccgacgcaggctga
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