Serpentinimonas raichei: SRAA_1425
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Entry
SRAA_1425 CDS
T03614
Symbol
ihfB
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
cbaa
Serpentinimonas raichei
Brite
KEGG Orthology (KO) [BR:
cbaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbaa03032
]
SRAA_1425 (ihfB)
03036 Chromosome and associated proteins [BR:
cbaa03036
]
SRAA_1425 (ihfB)
03400 DNA repair and recombination proteins [BR:
cbaa03400
]
SRAA_1425 (ihfB)
DNA replication proteins [BR:
cbaa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SRAA_1425 (ihfB)
Chromosome and associated proteins [BR:
cbaa03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SRAA_1425 (ihfB)
DNA repair and recombination proteins [BR:
cbaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SRAA_1425 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BAO81279
UniProt:
A0A060NQU4
LinkDB
All DBs
Position
complement(1534104..1534412)
Genome browser
AA seq
102 aa
AA seq
DB search
MTRSDLVQALAERFGQLGQRDAELAVKTILSAIAQALVKGQRVEVRGFGSFTLNERAARM
GRNPRSGASVAIEAKRVPHFKPGKALREQVDAGGAASRSNSA
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcagcgatctggtgcaggctttggcagagcgctttggccagttgggtcagcgc
gatgccgaattggccgtcaagacgatcctgtcggccattgcgcaggccttggtcaagggc
cagcgcgtcgaggtgcgcggttttggcagctttacgctgaacgaacgcgcggcgcgcatg
ggccgcaacccgcgcagcggtgcgagcgtggccatcgaggccaagcgcgtgccgcacttc
aaacccggtaaagccctgcgcgagcaggtcgatgccgggggcgcggcctcccgttcaaat
tccgcttga
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