Serpentinimonas raichei: SRAA_1562
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Entry
SRAA_1562 CDS
T03614
Name
(GenBank) response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
cbaa
Serpentinimonas raichei
Pathway
cbaa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cbaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SRAA_1562
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cbaa02022
]
SRAA_1562
02035 Bacterial motility proteins [BR:
cbaa02035
]
SRAA_1562
Two-component system [BR:
cbaa02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
SRAA_1562
Bacterial motility proteins [BR:
cbaa02035
]
Pilus system
Twitching motility proteins
SRAA_1562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
AAA_5
HTH_8
AAA_16
AAA
Peripla_BP_4
VpsR
Motif
Other DBs
NCBI-ProteinID:
BAO81416
UniProt:
A0A060NHM4
LinkDB
All DBs
Position
1683440..1685050
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AA seq
536 aa
AA seq
DB search
MSAAAPTPSRLLVVDDEPDLLTLYELTLRKSGHQVAAASDLAQARALLATQRFDALITDM
RLPDGLGLELVRELTQAGRSEKTIVVTAYGSANNAVEALKAGAFDYLTKPVAPAQLRAAV
ANALQAARPPCSAAQTNPVKPTAAGAGLDRGEELERVTDEPRRNTVTALGPMAGAGLGRG
EESERVTDEPRPSPAPATATGALQQLVGRSPAMCALRERVLRVARSMAPVLVLGESGTGK
ELVARALHHCSHRSDGPFVAVNCGAIPDTLLEAEFFGVRKGAYTGASAHREGYFQAARGG
TLFLDEIGDLPHPMQVKLLRAVQERRVRSLGATDDEATDVRLISATHIDLERAVAAGRFR
QDLYYRLNVIDLHLPPLRERLEDLTELAQSLLQRLSERNGNPEPPVLSPAALARLAQHPF
PGNVRELENLLERALALHHGPVLDAEAVWTPPPAAQRALPEASNGHAADFSPTQPPADGW
PAPAPDEHAPTREQLLAWLNLHRWNQSRAARQLGWTLAKLRYWMQRHGLTDAAAHH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgctgcccccaccccctcgcgcctgctcgtggtcgacgacgaacccgatttg
ctcacgctctatgagctgacgctgcgaaaaagcgggcatcaagtggccgccgccagcgat
ctggcgcaggcgcgcgccctgctggccacgcagcgcttcgacgccctgatcaccgacatg
cgcctgcccgacggtttggggctggagctggtgcgcgaactgacccaggctggccggtcc
gaaaaaaccatcgtggtgaccgcctacggatcagccaacaacgccgtcgaagccctcaaa
gccggcgcctttgactacctcaccaaacccgtggccccggcgcaactgcgcgcggcagtg
gccaatgcgctgcaagccgcccggccgccttgcagcgcggcgcagaccaacccggtcaaa
cccacagccgcgggggccgggctggaccggggtgaggaattggaacgtgtgactgacgaa
ccccggcgcaacacagtcacggccctaggcccgatggcgggggccgggctgggccggggt
gaggaatcggaacgtgtgactgacgaaccccggcccagcccggcccccgccaccgccacc
ggcgcgctgcaacaactggtgggccgcagccccgccatgtgcgcgctgcgcgagcgcgtg
ttgcgggtcgcgcgcagcatggccccggtgctggtgctgggcgaatcaggcaccggcaag
gaactggtggcgcgcgccctgcaccactgcagccaccgcagcgacggcccctttgttgcc
gtcaactgcggcgccatccccgataccctgcttgaagccgagttctttggcgtgcgcaaa
ggcgcttacaccggcgccagcgcgcaccgcgaaggttactttcaggccgcgcgtgggggt
accctgtttctggacgagatcggcgatttgccgcatccgatgcaggtcaagctgttgcgg
gcggtgcaagagcggcgcgtgcgcagcctcggcgccaccgacgacgaagcaaccgatgtg
cggctgatcagcgccacccacatcgacctcgaacgggcggtggctgcggggcgctttcgg
caagatttgtattaccgcctgaacgtgatcgacctgcacctgccccccttgcgcgaacgc
ctcgaagacctgactgaactcgcgcaatccttgctgcaacgtctgagcgagcgcaacggc
aaccccgagccacccgtgctcagccccgccgcgctggcccgcttggcccagcatcccttc
cccggcaatgtgcgcgaactggaaaacctgctcgaacgcgcgctcgccctgcaccacggc
cccgtgctcgacgccgaagcggtctggacgccgccgcccgcagcgcagcgcgccttgccc
gaggccagcaacggccatgcggcggatttcagccccacccagccgcctgcagacggctgg
cctgccccagcccccgatgagcacgcccccacccgggagcaactgctggcttggctcaac
ctgcaccgctggaaccagtcgcgtgccgcacgccagctcggctggacgctggccaaactg
cgctactggatgcagcgccacggcctgaccgatgcggcggcccaccactga
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