Serpentinimonas raichei: SRAA_1708
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Entry
SRAA_1708 CDS
T03614
Name
(GenBank) recombinational DNA repair protein, RecF pathway
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
cbaa
Serpentinimonas raichei
Pathway
cbaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SRAA_1708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbaa03400
]
SRAA_1708
DNA repair and recombination proteins [BR:
cbaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SRAA_1708
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SRAA_1708
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
BAO81562
UniProt:
A0A060NJ88
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All DBs
Position
complement(1827366..1828160)
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AA seq
264 aa
AA seq
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MNKRVHEEPSFVLHRHDWSEASLILEVFSRHHGRVALVAKGVKRPTSQFRSVLLALLPLH
LSWGGATEVRTLKAAQWQGGQLLPPGEALLAGYYLNELLLKLLAREDPHPTLYDHYAQAL
ALLAAGAPQAGVLRAFELLLLRELGWLPPLDHEAASLQPLRAEARYQLQTQGGLCELPPT
AADGDAASTAACSAPYWLALHAALQQVSVWPSLLPLCQQDRSGALRRQLRAALHYHSGVR
EFQTRRWAQQVQRFVGSRAVAVPV
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcgggtgcatgaggagccgtccttcgtgctgcaccgccacgactggagcgag
gccagcctgatcctggaggtgtttagccgccaccacgggcgcgtggcgctggtggccaag
ggggtgaagcgcccgacttcgcaatttcgctcggtgctgctggcgctgttgccgctgcac
ctgagctggggcggagccaccgaggtgcgcacgctcaaggcggcgcaatggcagggcggg
cagttgctgccaccgggcgaggccttgttggcgggctactacctgaacgaattgctgctc
aagctgctggcgcgcgaagacccgcacccgactctgtacgaccactacgcgcaagcgctg
gccttgctcgctgccggggcaccgcaggcgggggtgttgcgcgccttcgagttgctgctg
ctgcgcgaactgggctggttgccaccgctggatcacgaagccgccagcttgcagccgttg
cgcgccgaggcgcgctaccagttgcaaacgcagggcggcttgtgcgagctgccccccacg
gcggctgatggcgatgcggccagcacggcggcctgcagcgcgccttactggctggcgctg
cacgcggccttgcagcaggtgtcggtctggcccagcttgctgccgctgtgccagcaagac
cgcagcggggccttgcggcgccagttgcgcgccgccttgcactaccatagcggggtgcgc
gagttccagacccggcgctgggcgcagcaggtgcagcgcttcgtgggcagccgggcggtg
gcggtgccggtctga
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