Serpentinimonas raichei: SRAA_2052
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Entry
SRAA_2052 CDS
T03614
Symbol
topB
Name
(GenBank) topoisomerase IA
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cbaa
Serpentinimonas raichei
Brite
KEGG Orthology (KO) [BR:
cbaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbaa03032
]
SRAA_2052 (topB)
Enzymes [BR:
cbaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SRAA_2052 (topB)
DNA replication proteins [BR:
cbaa03032
]
Prokaryotic type
DNA Topoisomerases
SRAA_2052 (topB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
Zn_ribbon_PADR1
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
BAO81906
UniProt:
A0A060NIK4
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All DBs
Position
complement(2211915..2214734)
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AA seq
939 aa
AA seq
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MSMNNSNKTLVIAEKPSVALDLVRALTPLAGKFEKHDEYHESERYIVTSAVGHLVEIAAP
EAYEVKRGKWSFAHLPVIPPQFDLRPIEKSKGRLNAVVKLAKRKDVAELINACDAGREGE
LIFRLIEQYAGGSKGLGKPVQRLWLQSMTPQAIRDGFGALRSDAQMRPLADAARSRSEAD
WLVGINGTRALTAFNSRDGGFFLTTVGRVQTPTLAVVVEREEKIRAFKSRDYWEIHATFE
AQAGAYAGKWFDPAFKKPGAEAADAELKADRLWNAAAAEAIAAAVRGQPAQVSEESKPST
QASGLLYDLTSLQREANGRFGFSAKTTLALAQSLYERHKALTYPRTDSRALPEDYLPTVQ
QTVAMLAASGLAHLAPHARTAIEQGYIRPSKRVFDNAKVSDHFAIIPTLQAPSGLSEAEQ
KLYDLVARRFLAVFFPPAEFLLTTRISTVKLPTASHAFKTEGKVLVKPGWMAVYGKEAAD
ETEGAQAGDKGQRLVPVQPGETVRNSEAAVRALQTRPPARYNEATLLGAMEGAGKLIDDE
ELRSAMADKGLGTPATRAAIIEGLLSENYLLREGREIIPTAKAFQLMTLLRGLQVQELCK
PELTGEWEHKLALMERGQLSRADFMRQIAELTERMVRQAKEYDRDSVPGDYATLGTPCPN
CGGVVRENYRRYACTGAEAADGAEGAGQGCGFSFGKSPAGRTFERDEAEAFLRDKRIGPL
QGFRSKAGWPFVAELALAFSAEEQNWKLEFDFGDDKKAEASGELADFSAATALGPCPKCA
SPVYAHGSQYVCSHAVPSSVQAEPSCDFKSGAIILQQVVEPEQMGKLLHSGKTDLLQRFV
SNKTRRAFKAYLVWDAAAGKVGFEFEPRAGKAGAAKPAARKAAAKPAAAQAETQADAKAA
AKPAAARKATARKPAKVIAADQAAKPAAVRKPATRKSAS
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgaacaacagcaacaaaaccctggtgatcgccgaaaaaccttcggtcgccctt
gatctggtgcgcgccctgacgccgctggcgggcaagtttgagaagcacgacgagtaccac
gagagcgaacgctacatcgtgacctcggcggtcgggcatttggtggagatcgccgccccc
gaggcctacgaggtcaagcgcggcaagtggagttttgcgcacctgccggtgatcccgccg
cagttcgacttgaggccgatcgaaaaatccaaagggcgcctgaacgccgtggtcaagctg
gccaaacgcaaagacgtggcggagctgatcaacgcctgcgacgccgggcgcgagggcgag
ctgatctttcgcctgatcgagcagtacgccggtggcagcaaggggctgggcaagccggtg
cagcggctctggttacagtccatgacgccgcaggcgatacgcgacggctttggcgctttg
cgcagcgacgcgcagatgcgcccgctggccgacgccgcgcgcagccgctccgaggccgac
tggctggtgggcatcaacggcacccgggcgctcacggccttcaacagccgcgacggcggc
ttcttcctcaccaccgtgggccgggtgcagaccccgacgctggcggtggtggtcgagcgc
gaagaaaaaatccgcgccttcaaaagccgcgactactgggaaatccacgccactttcgag
gcccaagcgggtgcctacgcgggcaagtggttcgacccggccttcaaaaaacccggcgcc
gaggcggccgatgccgagctcaaggccgaccggctctggaatgcggcagcggccgaggcc
atcgccgccgcagtgcgcggccagccagcgcaggtgagcgaagaatccaaacccagcacc
caggccagcggcctgctgtacgacctcaccagcttgcagcgcgaggccaacggccgcttt
ggttttagcgccaaaaccacgctggcgctggcgcagagcctgtatgagcggcacaaggcc
ctgacctacccgcgcaccgacagccgcgccctgcccgaagactacctgcccacggtgcag
caaaccgtggccatgctggccgccagcggcctggcgcacctggccccgcacgcgcgcacg
gcgatcgagcaaggctatatccggcccagcaagcgcgtgttcgacaacgccaaggtgagc
gaccacttcgccatcattcccaccctgcaagcccccagtggcttaagcgaggccgagcaa
aagctctacgacctggtggcgcgccgttttctggcggtgttttttccgccggccgagttt
ttgctcaccacccgcatcagcaccgtgaagctgccaacggccagccacgccttcaagacc
gagggcaaggtgctggtcaagccgggctggatggcggtctatggcaaggaagccgccgac
gagaccgagggcgcgcaggccggcgacaaaggccagcgcctggtgccggtgcagccgggc
gaaaccgtgcgcaactccgaggccgccgtgcgcgccctgcaaacgcggcccccggcgcgc
tacaacgaagccaccttgctcggggccatggaaggcgcgggcaagctgatcgatgacgaa
gaactgcgcagcgccatggccgacaaggggctgggcacgcccgccacgcgcgccgccatc
atcgaaggcttgctgagcgaaaactacctgctgcgcgaggggcgcgagatcattcccacg
gccaaggcgttccagctcatgacgctgctgcgcggcctgcaggtgcaagagctgtgcaag
cccgagctgacgggtgagtgggagcacaagctggcgctgatggagcgcgggcagttgagc
cgcgccgacttcatgcgccagatcgccgagctgaccgagcgcatggtgcgccaggccaaa
gaatacgaccgcgacagcgtgccgggcgactacgccacgctgggtacaccctgccccaac
tgcggcggcgtggtgcgcgaaaactaccgccgctacgcctgcaccggggccgaagcggcc
gatggggcagaaggagccggccaaggctgtggcttttcctttggcaagtcgcccgccggg
cgcaccttcgaacgcgacgaagccgaagcctttttgcgcgacaagcgcatcggccccttg
caaggctttcgctccaaggccggctggcccttcgtggccgagctggcgctggccttcagc
gccgaggagcaaaactggaagctggaattcgattttggcgacgataaaaaggccgaggcc
agcggcgaactggccgacttcagcgccgccacggcgctcgggccttgccccaagtgcgcc
agcccggtctatgcgcacggcagccagtatgtgtgcagccacgccgtgcccagctcggtg
caggccgagccgagctgcgacttcaagagcggggccattattttgcagcaggtggtcgag
cccgagcagatgggcaagctgctgcacagcggcaagaccgatttgctgcagcgcttcgtc
tcgaacaaaacccggcgcgccttcaaagcctatttggtgtgggacgcggcggcgggcaag
gtcggtttcgagttcgagccgcgcgcgggcaaggcgggggcggccaaacccgcagcacgc
aaagccgcagcaaaaccggctgcggcccaagctgaaacgcaggctgacgcaaaggctgca
gccaagcccgctgcagcgcgcaaagccactgcgcgcaagccagccaaggtgatcgccgca
gatcaagcggctaaacccgccgccgtgcgcaagcccgccacgcgcaaaagcgcgagctga
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