Serpentinimonas maccroryi: SMCB_0050
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Entry
SMCB_0050 CDS
T03627
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit/40 kD subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cbab
Serpentinimonas maccroryi
Pathway
cbab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cbab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SMCB_0050 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbab03021
]
SMCB_0050 (rpoA)
03400 DNA repair and recombination proteins [BR:
cbab03400
]
SMCB_0050 (rpoA)
Enzymes [BR:
cbab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SMCB_0050 (rpoA)
Transcription machinery [BR:
cbab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SMCB_0050 (rpoA)
DNA repair and recombination proteins [BR:
cbab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SMCB_0050 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
DUF6165
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
BAO82278
UniProt:
A0A060NRX2
LinkDB
All DBs
Position
48004..48990
Genome browser
AA seq
328 aa
AA seq
DB search
MLNNLLKPKNIQVEHLGPNHAEVTLEPFERGYGHTLGNALRRVLLASMVGHAPTEVTISG
VLHEFSSIDGVQEDTVDMLLNLKGVVFKLHGRDEVTLSLRKEVEGLVTAGDIQTPHDVEI
LNPQHPIATLSAGTKLDMQIKVEKGRGYVPGNLRRGEDSTRSIGRILLDASFSPVKRVSY
AVENARVEQRTDLDKLVLDIETNGAVAPEEAVRAAAKILVEQLAVFAQLVRDESSDFGAS
PSRASQQFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLN
EIKEVLASRGLTLGMKLESWPPAGLDKH
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacaatctcctgaaacccaagaacattcaagtcgagcacctcggccccaaccac
gccgaagtcacgctcgagccctttgagcgcggctatggccacacgctgggcaacgcgctg
cgccgggtgttgttggcttcgatggtcggccacgctcccaccgaggtcaccatctcgggt
gtgttgcatgagttttcttcgatcgacggcgtgcaagaagacactgttgacatgctgctc
aacctcaaaggcgtggtgttcaagctccacggccgcgacgaagtcaccttgagcctgcgc
aaagaggtcgaaggcctggtcacagcgggcgacatccagaccccgcacgacgtggaaatc
ctgaatccgcagcaccccatcgccaccctgagcgcgggcaccaagctcgacatgcagatc
aaggtcgagaagggccgcggctacgtgcccggcaacctgcgccgcggcgaggacagcacg
cgctcgatcggccgaattttgctcgatgcctctttttcgccggtcaagcgcgtcagctac
gcggtggaaaacgcccgcgtcgagcagcgcaccgacctcgacaagctggtgctggacatc
gaaaccaacggtgccgtggcacccgaggaagcggtgcgcgccgcggccaagattctggtc
gagcagctggcggtgtttgcccagttggtccgcgacgaatcgtccgactttggcgcctcg
cccagccgcgcttcgcagcagtttgacccgattttgctgcgcccggtcgatgagctcgag
ctcacggtgcgctcggccaactgcctcaaggccgaaaacatctactacatcggtgacctg
atccagcgcaccgaaaacgagctgctcaaaacccccaacctgggtcgcaagtcgctcaac
gaaatcaaggaagtgctggcttcgcgcggcttgacgctgggcatgaagctggagagctgg
ccgcccgctgggctggacaagcactga
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