Serpentinimonas maccroryi: SMCB_0273
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Entry
SMCB_0273 CDS
T03627
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cbab
Serpentinimonas maccroryi
Pathway
cbab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cbab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SMCB_0273 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbab03019
]
SMCB_0273 (orn)
03009 Ribosome biogenesis [BR:
cbab03009
]
SMCB_0273 (orn)
Messenger RNA biogenesis [BR:
cbab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SMCB_0273 (orn)
Ribosome biogenesis [BR:
cbab03009
]
Eukaryotic type
Pre-60S particles
RNases
SMCB_0273 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
BAO82501
UniProt:
A0A060NJK2
LinkDB
All DBs
Position
302800..303390
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AA seq
196 aa
AA seq
DB search
MRAMQTPDEPKAATAELHHSDQNLVWIDCEMSGLDPEKERLLEIAVVVTGPQLSPRIDGP
VLVLQQSEALLAAMDNWNKGTHGKSGLLDKVRASRLSEAEAEAELLAFLRRYVPKGGSPM
CGNSVGQDRRFLLKYLPKLEDYFHYRNLDVSTLKELAKRWRPEVYAAFKKQQRHTALADV
HESIDELEHYRQHLLR
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccatgcaaacccccgacgaacccaaggccgcaacggccgaactgcaccacagc
gaccaaaacctggtctggatcgactgcgagatgagcgggctcgacccggaaaaagagcgc
ctgctggagatcgccgtggtggtgaccgggccgcagctgagcccgcgcatcgacggcccg
gtgctggtgctgcagcaaagcgaggcgctgctggcggcaatggacaactggaacaaaggc
acgcacggcaagagcggcctgctcgacaaggtgcgcgccagccgcctgagcgaggccgag
gccgaagccgagctgctggccttcctgcgccgctatgtgcccaagggcggctcgcccatg
tgtggcaacagcgtcggccaagaccggcgctttttgctcaagtacctgcccaagctcgag
gactacttccactaccgcaacctcgacgtgagcacgctcaaagagcttgccaaacgctgg
cgccccgaggtctatgcggccttcaaaaaacaacagcgccacaccgcgctggccgatgtg
cacgagtcgatcgacgagctggagcactaccgccagcacctgctgcgctaa
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