Serpentinimonas maccroryi: SMCB_0281
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Entry
SMCB_0281 CDS
T03627
Name
(GenBank) DNA polymerase I - 3'-5' exonuclease and polymerase domains
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cbab
Serpentinimonas maccroryi
Pathway
cbab03030
DNA replication
cbab03410
Base excision repair
cbab03420
Nucleotide excision repair
cbab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMCB_0281
03410 Base excision repair
SMCB_0281
03420 Nucleotide excision repair
SMCB_0281
03440 Homologous recombination
SMCB_0281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbab03032
]
SMCB_0281
03400 DNA repair and recombination proteins [BR:
cbab03400
]
SMCB_0281
Enzymes [BR:
cbab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMCB_0281
DNA replication proteins [BR:
cbab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SMCB_0281
DNA repair and recombination proteins [BR:
cbab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SMCB_0281
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMCB_0281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BAO82509
UniProt:
A0A060NUC5
LinkDB
All DBs
Position
311660..314557
Genome browser
AA seq
965 aa
AA seq
DB search
MTESPPTLLLVDGSSYLYRAFHAMPDLRAVPGDPSSPATGALRGLINMAQALLREHPAQS
AAFVFDAPGPTFRDALYPAYKAQRSPMPDDLRAQIEPIHTVLRLLGWPVLCVPGVEADDV
LGTLAQRAAAAGVQVVISSGDKDMSQLVGPRVMVIDTMSGKRRDVAGVQAEFGVLPQQMV
DYQCLVGDTVDNVPGVEKVGPKTAVKWLLEYGSLEAIVAHAEQMPGAVGAKLRAALDWLP
TARQLLRIKTDCDLSAHLSAPDVQQALRLQAPDRAALRDFYQRYGFKTLVRALEEGGAAD
GAQREAGAKPGGWARRGEGAKLAGVEAASAAPADQASMFDIAGPDAASASAQAAEAESAH
APTPPPRHYQTVLTWEALHAWLPRLQAAPLVALDTETTGLDPMRAEIVGLSWSLEAGAAA
YLPLAHDYPGAPEQLPRAAALECLRPWLENPAAAKLGQHLKYERHVFANHGIELRGLEHD
TLLQSYVLEAHLPHSLESLAERHLGQRGLSYAELCGKGAQQIPFAQVDIERASTYACEDS
DFTLQVHQRLWPRLQAEAPLRAVYGLEIACSEVLYRIERHGVLIDAATLARQSHELGLRL
VELEARAHALAGQPFNLASPKQLGEILYDRLGLPVLKKTATGARSTDEEVLEKLAEDYPL
PAQILQHRSLAKLKGTYTDKLAALAHPRTGRVHTHYAQAVAVTGRLSSNEPNLQNIPIRT
PEGRRVREAFVAAPGHLIASADYSQIELRIMAHLSDDPALLRAFHDGLDVHRATAAEVFG
LAPEQVSAEQRRYAKTINFGLIYGMSSFGLAKALGIDTGAARNYIERYFERFAGVRRYMD
ATRAEAKARCCVHTVLGRRLHLPEINSPNAARRAAAERAAINAPMQGTAADLIKLSMVAV
QQALDAQGRASRMIMQVHDELVFELPAAEQDWLRTEVPRLMAGVAALKVPLLAEVGFGAN
WEQAH
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatctccccccaccctgctgctggtcgatggctcgagctacctctaccgcgcc
tttcacgccatgcccgatttgcgcgccgtgcccggcgaccccagcagcccggccaccggc
gccctgcgcggcctcatcaacatggcgcaggcgctgttgcgcgagcacccggcgcagagc
gccgcctttgtgttcgacgcgcccggccccacctttcgcgatgcgctctacccggcctac
aaagcgcagcgcagccccatgcccgacgatttgcgcgcccagatcgagcccatccacacg
gtgctgcgcctgctcggctggccggtgctgtgcgtgcccggggtcgaggccgacgatgtg
ctgggcacgctggcgcagcgcgccgccgcggccggggtgcaggtggtgatttcgagcggc
gacaaagacatgagccagctcgtggggccgcgggtgatggtgatcgacaccatgagcggc
aagcggcgcgacgtggccggggtgcaggccgagtttggcgtgctgccgcagcaaatggtg
gactaccagtgcctggtgggcgacacggtcgataacgtgcccggcgtcgagaaggtgggc
ccgaaaaccgccgtcaaatggctgctcgaatacggctcgctcgaggccatcgtggcccac
gccgagcagatgcccggcgccgtgggcgccaagctgcgcgcggcgctggactggttgccc
acggcgcgccagctgctgcgcatcaaaaccgactgcgacctgagcgcgcacctgagcgcg
ccggacgtgcagcaagcgttgcgcttgcaagcccccgatcgggcggcgctgcgcgatttt
taccaacgctacggctttaagacgctggtgcgggcgctggaggagggcggggcggctgat
ggggcgcagcgggaggcaggggccaagccggggggctgggctaggcgtggagaaggcgcc
aaactggctggcgtcgaagcggccagcgccgcgcccgccgaccaagcctctatgtttgac
atcgccgggccagatgccgcatcagcttcagctcaggccgccgaggcggaatcagcacac
gcccccacccccccaccgcgccactaccagaccgtgctcacctgggaggcgctgcacgcc
tggttgccgcggctgcaggcggcgccgctggtggcgctcgacaccgagaccacgggcctc
gaccccatgcgcgccgaaatcgtcggcctgtcgtggagcctcgaagccggcgcggccgct
tatctgccgttggcgcacgactaccccggcgcgcccgagcagctgccgcgcgcggcggcg
ctggagtgcctgcgcccttggctggaaaacccggccgcggccaaactcggccagcacctc
aagtacgagcgccacgtgttcgccaaccacggcatcgagctgcgcggcctcgagcacgac
acgctgctgcaaagctatgtgctcgaagcacacctgccgcacagcctcgagagcctggcc
gagcgccacttgggccagcgcggtttgagctacgccgagctgtgcggcaagggcgcgcag
cagataccgtttgcgcaagtcgatatcgagcgcgccagcacctacgcctgcgaagacagc
gatttcacgcttcaggtgcaccagcgcctgtggccgcggctgcaggccgaggcgccgctg
cgcgccgtctatgggctcgaaatcgcgtgctccgaggtgctctaccgcatcgagcgccac
ggcgtgttgatcgatgccgccaccttggcgcgtcagagccacgaattgggcctgcgcctg
gtcgagctcgaggcgcgcgcccacgccttggccggccagccgttcaacttggccagcccc
aagcagctgggcgagattttgtacgaccggctgggcctgccggtgctcaaaaaaaccgcc
accggcgcgcgcagcaccgacgaagaagtgctcgaaaaactggccgaagactacccgctg
ccggcgcagattttgcagcaccgctcgctggccaaactcaagggcacctacaccgacaag
ctggcggcgctggcgcacccgcgcaccgggcgcgtgcacacccactacgcgcaggccgtg
gccgtgaccgggcgcttgtcgagcaacgagcccaatctgcaaaacatccccatccgcacg
cccgagggccggcgcgtgcgcgaggcgttcgtggccgcgcccgggcatctgatcgccagc
gccgactactcgcagatcgagctgcgcatcatggcgcacctgagcgacgacccggccctg
ctgcgcgccttccacgacgggctggacgtgcaccgcgccaccgccgccgaagtctttggc
ctggcgcccgagcaggtgagcgccgagcagcgccgctacgccaagacgatcaattttggc
ctgatctacggcatgagcagctttgggctggccaaggcgctgggcatcgacaccggggcg
gcgcgcaactacatcgagcgctattttgagcgctttgccggcgtgcgccgctacatggac
gccacccgcgccgaagccaaagcgcgctgctgcgtgcacacggtgctgggccggcgcctg
cacctgcccgagatcaactcgcccaacgccgcgcgccgcgccgccgccgagcgcgccgcc
atcaacgccccgatgcagggcacggccgccgacctgatcaagctcagcatggtggcggtg
cagcaggcgctcgacgcccaaggccgcgccagccgcatgatcatgcaggtgcacgacgag
ctggtgttcgagctgcccgcagccgagcaagattggctgcgcaccgaggtgccgcgcctg
atggccggcgtggccgcgctcaaggtgccgctgctggccgaagtgggttttggcgccaac
tgggagcaggcgcattga
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