Serpentinimonas maccroryi: SMCB_0551
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Entry
SMCB_0551 CDS
T03627
Symbol
capD
Name
(GenBank) predicted nucleoside-diphosphate sugar epimerase
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
cbab
Serpentinimonas maccroryi
Pathway
cbab00541
Biosynthesis of various nucleotide sugars
cbab00552
Teichoic acid biosynthesis
cbab01100
Metabolic pathways
cbab01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
cbab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SMCB_0551 (capD)
00552 Teichoic acid biosynthesis
SMCB_0551 (capD)
Enzymes [BR:
cbab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
SMCB_0551 (capD)
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GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
RmlD_sub_bind
GDP_Man_Dehyd
adh_short
TrkA_N
3Beta_HSD
DapB_N
CoA_binding_3
PglD_N
Motif
Other DBs
NCBI-ProteinID:
BAO82779
UniProt:
A0A060NV58
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Position
596095..598173
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AA seq
692 aa
AA seq
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MIQDEKGNALSSHLVRTAQTVLALPRPLKRTLALVVDGALCVLTVWLAFYLRLDLWLPWQ
GTADNLYRPYLAALAALAIALPLFVVNGFYRVIFRYTDWAAAQTLLRVFALYAVLYAGVV
TVLGLPGVPRSVGIIQPLLLGVAVGATRVLARYWLGGLYQDMSARSSLPKALIYGAGQTG
RELARVLAHSQELKLAGYIDDDERLHGQVLGGLPIVSPADVPALVNKAGVRTVLLAMPKL
ERARRNQILETLRPLRVALRTLPRWSDAAHGRISSADLHELDVDDLLGREPVAPNHILLA
KNIVGKVVLVTGAGGSIGSEICRQIVRQRPAVLLLLENNEYALYALERELHALCADGADD
AEAGEGGAGGADGLSTSPTNPDDSFCGGVRRVPLLANVQDAARLDEIMRTWRPDTVYHAA
AYKHVPLVEHNPAEGIRNNVWGTLRAAQAAAANGVSDFVLVSTDKAVRPTNVMGASKRLA
ELALQALAAEPALRGRTRMCMVRFGNVLGSSGSVVPLFRQQIRDGGPITLTHPEVTRFFM
TIPEAAQLVIQAGAMAKGGDVFVLDMGQPVRIYDLAQRMVELSGLTLRDAAHPQGDIGIE
ISGLRPGEKLYEELLIGNDPQPTVHPRIMKAHEASWPWPQLQPKLATLELALQVNDVALL
RLLLQELVEGYTPDGEIVDWVHLEQAVGQGRL
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtgatacaagacgaaaaaggcaatgcattgagctcacacctggtgcgtacagcgcaaacc
gtattggcgctgccgcgcccgctcaagcgcacgctggcgctggtggtggatggggcgttg
tgcgtgctcacggtgtggctggcgttttatttgcggctcgacctttggttgccgtggcag
ggtacggctgacaatttgtaccgcccctatttggcggcgctggcggcgctggccattgcg
ctcccgttgtttgtggtcaatggcttttaccgcgtcattttccgctacaccgattgggcg
gcagcgcagacgctgttgcgcgtgtttgcgctttatgccgtgttgtacgccggcgtggtg
acggtgctggggctgcccggggtgccgcgcagtgtgggcatcatccagcccttgctgctg
ggggtggcggtgggggctacgcgggtgttggcgcgctattggctgggcggcctgtaccaa
gatatgtcggcgcgcagcagtttgcccaaggcgctgatctacggtgctgggcaaaccggg
cgcgaactggcccgggtgctggcgcacagccaagagctgaaattggccggctacatcgac
gacgacgagcgcttgcatggccaggtgctaggcggcttgccgattgtgtcgccggccgat
gtgcccgcactggtcaacaaagccggggtgcgcacggtgctgctggccatgcccaagctg
gagcgcgcgcgccgcaaccagatcctcgagaccctgcgcccgctgcgggtggcgctgcgc
acgctgccgcgctggagcgacgcagcgcacggccgcatcagcagcgccgatctgcacgaa
ctggatgtggacgacctgctggggcgcgagccggtggcgcccaaccacattttgctggcc
aaaaacatcgtcggcaaggtggtgctggtgaccggtgccgggggctcgatcgggagcgag
atctgccgccagatcgtgcgccagcgcccggcggtgctgctgctgctcgaaaacaacgag
tacgcgctctatgcgctggagcgcgagctccatgccttgtgcgccgatggagctgatgac
gccgaagcaggcgagggcggcgcaggcggcgccgatggcttatccacaagcccaaccaac
ccagacgactcattctgtggcggcgtgcgccgggtgccgctgctggccaatgtgcaagac
gcggcgcggctcgacgagatcatgcgcacttggcgccccgacacggtctatcacgccgcg
gcctacaagcatgtgccgctggtggagcacaacccggccgagggcatacgcaacaacgtc
tggggcacgctgcgcgcggcgcaggcggcggcggccaatggggtgagcgattttgtgctg
gtgagcaccgacaaagccgtgcgcccgaccaacgtcatgggcgccagcaagcgcttggcc
gagctcgccttgcaggcgctggccgccgaaccggcgctgcgtggccgcacccgcatgtgc
atggtgcgctttggcaatgtgttgggttcgtcgggttcggtggtgccgctgtttcggcag
cagatccgcgacggcggcccgatcacgctcacgcaccccgaggtgacgcgtttttttatg
accatacccgaggcggcgcagctggtgatccaagccggcgccatggccaagggcggcgac
gtgttcgtgctcgacatgggccagccggtgcgcatttacgacctcgcgcagcgcatggtc
gagctctcgggcctgacgctgcgcgacgccgcacacccgcagggcgacataggcatcgag
atcagcggcttgcgcccgggcgaaaagctgtacgaagagctgctcatcggcaacgacccc
cagcccacggtgcacccacgcatcatgaaagcgcacgaagccagctggccctggccgcag
ctgcagcccaagctggccacgctcgaactggcgctgcaagtcaacgacgtggcgctgctg
cgcctgctgctgcaagagctggtcgaaggctacacccccgacggcgagatcgtcgattgg
gtgcacctagagcaggcggtggggcagggccgactgtga
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