Serpentinimonas maccroryi: SMCB_1309
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Entry
SMCB_1309 CDS
T03627
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cbab
Serpentinimonas maccroryi
Pathway
cbab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMCB_1309 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbab03019
]
SMCB_1309 (pnp)
03016 Transfer RNA biogenesis [BR:
cbab03016
]
SMCB_1309 (pnp)
Enzymes [BR:
cbab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SMCB_1309 (pnp)
Messenger RNA biogenesis [BR:
cbab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SMCB_1309 (pnp)
Transfer RNA biogenesis [BR:
cbab03016
]
Prokaryotic type
tRNA degradation factors
SMCB_1309 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
DNA_pol3_a_NI
Phage_tube
Motif
Other DBs
NCBI-ProteinID:
BAO83537
UniProt:
A0A060NP40
LinkDB
All DBs
Position
complement(1410334..1412463)
Genome browser
AA seq
709 aa
AA seq
DB search
MGLFNKVSKSFQWGRHTVRLETGEIARQSSGAVLLDMDGTVVLATVVAKTDAKSGQDFFP
LTVDYLEKSYAAGKIPGSFFKREGRPSEFETLTSRLIDRPIRPLFPEGFFNEVQVVVHTL
SLNPEVDADIAALIATSAALSISGIPFNGPIGAARVGYVNGQYILNPGQTERANSQLDLV
VAGTEAAVLMVESEAQQLSEEVLLGAVVFGHEQGNIAIAAINELVREAGKPEWDWQPPAR
DEALIARVEALGREALVAAYQIRNKQARTQACRQAYAAVHAGLKAEGLVCDAVKVEELLF
NIEAGIVRGQILAGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVIATLGT
ERDAQRIDALAGDFEDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVAALPPK
DEFPYTVRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGNRFAVL
TDILGDEDHLGDMDFKVAGTPAGITALQMDIKIQGITKEIMQVALAQAKEARLHILGEMQ
AAMGQANTEISSFAPRLYTMKINPEKIRDIIGKGGATIRALTEETGTQIDIAEDGTITIA
SSEAAKAEHAMRRIEAITAEVEIGKVYEGPITKILDFGALVNLLPGKDGLLHISQIAHQR
VEKVTDYLKEGQIVKVKVLETDEKGRVKLSMKALLDRDEVQPAQQPQDD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgtttaacaaagtcagcaaaagcttccaatggggccgccacaccgtgcgcctc
gaaaccggcgaaatcgcgcgccagtccagcggcgccgtgctgctcgacatggacggcacc
gtggtgctggccaccgtggtcgccaaaaccgacgccaagtcgggtcaagactttttccca
ctcaccgtcgattacctcgaaaaatcctacgctgccggcaaaattccgggcagcttcttc
aagcgcgaagggcgcccgagcgagttcgaaaccctcaccagtcgcctgatcgaccgcccg
attcggcccctgttccccgagggctttttcaacgaagtgcaggtggtggtgcacaccctg
tcgctcaaccccgaggtcgatgccgacatcgccgccctgatcgccaccagcgccgcactg
tccatcagcggcatccccttcaacggccccatcggcgccgcgcgggtgggctacgtcaac
ggccagtacatcctcaaccccggccagaccgagcgcgccaacagccagctcgatctggtg
gtggccggcaccgaagcggcggtgctgatggtcgagagcgaagcgcagcagttgtccgaa
gaggtgttgctgggtgccgtggtctttggccacgagcaaggcaacatcgccatcgccgcc
atcaacgaactggtgcgcgaagccggcaagcccgaatgggactggcagccgccggcgcgc
gacgaggcgctgatcgcccgcgtcgaggcgctgggccgcgaggccctggtggcggcctac
cagatccgcaacaagcaagcgcgcacccaggcctgccgccaagcctacgccgccgtgcac
gccgggctcaaggctgaggggctcgtgtgcgacgcggtcaaggtcgaagagctgctgttc
aacatcgaagccggcatcgtgcgcgggcagattctggccggcgagccgcgcatcgacggc
cgcgacacgcgtaccgtgcgcccgatcgaaatccgcaccggcgtgctgccgcgcacccac
ggctcggcgctgttcacgcgcggcgaaacgcaggcgctggtaatcgccaccctgggcacc
gagcgcgacgcgcagcgcatcgacgcgctggccggcgattttgaagaccgcttcatgctg
cactacaacatgccacccttcgccaccggcgaaaccgggcgcgtaggcagccccaagcgg
cgcgagatcggccacggccgcttggccaagcgcgcgctggtcgccgcgctgccgcccaaa
gacgagtttccctacaccgtgcgcgtggtgagcgaaatcaccgagtccaacggttcgtcg
tccatggcttcggtctgcggcggctgcttggcgctgatggacgccggcgtgcccatgaaa
gcgcacgtggccggcatcgccatgggcctgatcaaagagggcaaccgcttcgccgtgctc
accgacattttgggcgacgaagaccacctcggtgacatggacttcaaggttgcgggcacc
ccagccggcatcaccgccttgcagatggacatcaaaatccaaggcatcaccaaagagatc
atgcaagtcgcgctggcgcaagccaaagaggcgcgcctgcacattctgggcgagatgcaa
gcggcgatggggcaggccaacaccgagatttcgagctttgcgccgcgcctctacaccatg
aagatcaacccggaaaaaatccgcgacatcatcggcaagggcggcgccaccatccgcgcc
ctgaccgaagaaaccggcacccagatcgacatcgccgaagacggcaccatcaccatcgcc
agcagcgaagcggccaaggccgaacacgccatgcgccgcatcgaggccatcacagccgaa
gtggaaatcggcaaggtctatgaaggcccgatcaccaagatcctcgatttcggggccctg
gtgaacctgctgcccggcaaagacggcctgctgcacatcagccagatcgcgcaccagcgc
gtcgaaaaagtgaccgactacctaaaagagggccagatcgtcaaggtcaaggtgctcgag
accgacgaaaaaggccgcgtcaagctgtcgatgaaggcgctgctcgatcgcgacgaggtg
caaccggcgcagcagccgcaagacgactga
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