Serpentinimonas maccroryi: SMCB_1408
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Entry
SMCB_1408 CDS
T03627
Name
(GenBank) 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
cbab
Serpentinimonas maccroryi
Brite
KEGG Orthology (KO) [BR:
cbab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbab03009
]
SMCB_1408
Enzymes [BR:
cbab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
SMCB_1408
Ribosome biogenesis [BR:
cbab03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SMCB_1408
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
BAO83636
UniProt:
A0A060NM55
LinkDB
All DBs
Position
complement(1521827..1523125)
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AA seq
432 aa
AA seq
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MVRPREAQVAAPAIAVHAPVPGVDGQGIDAPGLDAANASATDAGAALADAVGFEAVVSGA
FDADLSLPPEPEQPAPPSKRVLEPEAEAPKLHKVLAQAGLGSRLEMERLIAQGQISVNGE
PAHVGQRIQIGDAIRVNGRLIKVRIAPLPPRVLAYHKPAGEVVTHDDPQNRPTVFRRLPR
LYSGKWQSVGRLDINTEGLLLLTNSGELAHLLMHPSFGLQREYAVRVLGALSLEEKQKLL
DGVLLDDGPAQFQTLEDGGGDGANCWYRVTIAEGRNREVRRMFESLGHAVSRLIRIRYGA
VTLPRGLRRGAWMELDARDVARLTEATGMDRTLESRARQFQPPAPPKRQPSRGRSQGPRP
SAPKLVDGAPMPLNTGRTGRTGRNTDRNSDRSSDRSSARGGPSPGASPRSNPGAGSGPKR
GAPRGPKSGPAR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtggtgcgcccgcgcgaggcccaagtggccgcgccagcgatcgccgtacacgcgcccgtg
ccgggtgtcgatgggcaaggcatcgatgcgccgggcctagacgcagcaaacgcaagtgca
acagatgcaggtgcagcgctggcagacgccgtgggtttcgaggccgtggtgtcgggcgct
ttcgatgccgatttgtctttgccgcctgagcccgagcagcccgcaccgccgtccaagcgg
gtgctcgagcccgaggccgaagcacccaagctgcacaaggtgctggcgcaggccgggctg
ggttcgcggctcgagatggagcgcctgatcgcccaaggccagatctcggtcaacggcgag
ccggcccacgttgggcagcgcatccagatcggcgacgccatccgcgtcaacggtcgcctg
atcaaggtgcgcatcgcgccgctgccgccgcgcgtgctggcctaccacaaaccggccggt
gaggtggtgacgcacgacgacccgcaaaaccgccccaccgtgtttcgccgcctgccccga
ctctacagcggcaagtggcagtcggtcgggcggctcgacatcaacaccgagggcctgctg
ctgctgaccaactcgggcgagctggcgcacctgctgatgcaccccagctttggcttgcag
cgcgaatacgcggtgcgcgtgctgggcgcgttgagcctcgaggaaaaacaaaagctgctc
gacggcgtgctgctcgatgacggtccggcgcagttccagacgctcgaagacggtggcggc
gacggggccaactgctggtaccgggtgacgatagccgaaggccgcaaccgcgaagtgcgg
cgcatgttcgagtcgctcgggcacgcggtgagccgcctgatccgcatccgctacggtgcc
gtgaccctgccgcgcggcctgcgccggggtgcttggatggagctcgacgcgcgcgacgtg
gcgcgcctgaccgaggccacgggcatggaccgcacgctggagtcgcgcgcacgccagttt
caaccgcccgcgccgcccaagcgccagccctcgcggggccgcagtcaagggccgcgcccg
agtgcgcccaaattggtcgatggcgcgcccatgccgctcaacaccggccgcaccgggcgc
acggggcgcaacaccgaccgcaacagcgaccgcagcagcgaccgcagcagcgcgcgcggt
ggccccagccccggtgccagcccaagatccaaccccggtgccggttccggccccaaacgc
ggtgccccgcgcggccccaaatccggcccagcacgctga
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