Serpentinimonas maccroryi: SMCB_2102
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Entry
SMCB_2102 CDS
T03627
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cbab
Serpentinimonas maccroryi
Brite
KEGG Orthology (KO) [BR:
cbab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbab03400
]
SMCB_2102
Enzymes [BR:
cbab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMCB_2102
DNA repair and recombination proteins [BR:
cbab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SMCB_2102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Phage_portal_3
Motif
Other DBs
NCBI-ProteinID:
BAO84330
UniProt:
A0A060NSN8
LinkDB
All DBs
Position
2275801..2278647
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AA seq
948 aa
AA seq
DB search
MVLCATTRLATELRQRHGQWQAAKGQRSWQALDCRTLGQWLAALRQQWLLRSTPPIPELA
RTPLSAWQERELWQRLIAQRLGPEAPYLFDLPALAQSAQQALALQLVWDVEVGAPPLAAE
AQQYLLWRSDFWAECAAQGCATTEQLDRATVDALASLDQAPAGPGWPQRLLLAGFPRLSP
LLQALLQQLQRLGLQVQQLADEPAAERIELRSYPDAAAECLAAAQWAQAQLALDAQRRIA
IVAPDLRALRLQLHDTLQDVLAPELLHPQRAQAAPPFNLSLGAPLAEQALVGGALALLQC
LARPDELSLNDVGALLRHPYWSAPDEALVRAQLDARLRSALPARVALGQVLAWATAQRGR
WQGPDPAPSEPTQPNQLDQPNAPAPWPSAQPAPALCLQHLQHLQQLAARAAGQSHPPSHW
AELLPGWLEQAGWLHRRSLSSPEFQALQAWQEALAELGRLDACCGPLRLGGCVQRLQALC
RERIFQPQSVGQPRLQVLGALEASGLRFDAVWVLGLHAAAWPPPPQPNPLLPYAAQRRAA
SPNASAAVQYAFAQQVQQRLLCTAPALWLSWPRSAEAAPCQPSPLLADLPSASTCEAAPN
PHWSAQALRSGQALAAHTTLDDAWAPPMSAEEAARGGSALLRAQALCPAWAYYQYRLAAL
GLPDAAEDLDARQRGSLMHAALARLWQALRDSTTLHDLSAAACQAAIEQACCGALEDYLA
KPDQPPLSARRRALEQRRLERLLQRWLEIERTRGSGFAVVGIEKNETVELCSLQLKLQID
RIDQLDDGRLLVIDYKSSPSIDTRNWSSQRLSEPQLPLYATCATLPPGQVAGALFAKVRP
ADPGWAGLVADDAAHPQPSAQSTLRWDSSRNRARYPPTRFPGWEAVLQHWRERLQALAAE
VRAGDAAVRLADPAQLRHCEVLPLLRLSERRSQWLALQAQATAGAPMA
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
ttggtgctgtgcgccaccacgcgcttggccaccgaactgcgccagcgccatggccaatgg
caggccgccaaagggcagcgcagttggcaggcgctggattgccgcaccctgggccagtgg
ctggcggcgctgcgtcaacagtggttgctgcgcagcacgccgcccatccccgagttggca
cgcacccccttgagcgcttggcaggagcgcgagctctggcagcgcctgatcgcgcagcgc
ctaggccccgaagcgccgtatctgtttgacttgcccgcgctggcgcagtcggcgcagcag
gcgctggctttgcagctcgtctgggacgttgaggtgggcgcgccgccgctggcggccgaa
gcgcagcagtacctgctgtggcgcagcgatttttgggccgagtgcgcggcgcagggctgt
gccaccaccgagcagctcgaccgcgccaccgtggacgcgctggccagcctagatcaagcg
cctgccgggccgggctggccgcagcgcctgctgctggcgggctttccgcgcctgagccct
ttgttgcaagcgctgctgcagcaactgcagcggctggggctgcaggtgcaacagctggcc
gatgagcccgctgccgagcgcatcgagctgcgcagctaccccgacgccgccgccgagtgc
ctggccgccgcgcagtgggcgcaggcgcagctggcgctcgatgcgcagcggcgcatcgcc
atcgtcgcgcccgatctgcgcgcgctgcgcttgcagctgcacgacacgctgcaagacgta
ttggcccccgagctgctgcacccgcagcgcgcccaagccgcgccgcccttcaacctgtcg
ctgggcgcgccgctggccgagcaggcgctggtggggggggcgctggcgctgctgcagtgc
ctggcgcggcccgacgagctcagcctgaacgacgtcggcgcgctgctgcgccacccctac
tggtcggcgcccgacgaggcgctggtgcgcgcgcagctcgatgcgcggctgcgcagcgcg
ctgccggcacgggtggcgctggggcaggtgctggcttgggccacggcccagcgggggcgc
tggcagggtcccgacccagcgccatcggagcccacccagcccaatcaactcgatcagccc
aacgcgcctgccccatggcccagcgcccagcccgcaccagcgctgtgcctgcagcacctg
cagcacctgcagcagctcgccgcccgtgccgctggccaaagccacccgccctcgcactgg
gcggagctgctgcccggctggctggagcaggccggctggctgcaccggcgcagcctctcg
agccccgagttccaggcgctgcaggcgtggcaagaggcgctggccgaactgggccgcctc
gacgcctgctgcggccccttgcgcctggggggctgcgtgcagcgcctgcaagccttgtgc
cgcgagcgcatttttcagccacaaagcgtgggccagccgcgcttgcaggtgctgggcgcg
ctcgaagccagcggcttgcgcttcgacgcggtctgggtgctgggcttgcacgccgccgcg
tggccgccgccgccgcagcccaaccctttgctgccctatgccgcccagcgccgcgccgcc
agccccaacgccagtgccgccgtgcaatacgcctttgcgcagcaggtgcagcagcggctg
ctgtgtaccgcgccggcgctgtggctgtcgtggccgcgcagcgccgaggcggccccgtgc
cagcccagccccttgttggcggatctgcccagcgccagcacctgcgaggcagcgccaaac
ccgcactggagcgcgcaggcgctgcgcagcggccaagcgctggcggcgcacaccacccta
gacgatgcctgggcaccgcccatgagcgccgaggaagcggcgcgtggcggcagcgccttg
ctgcgggcccaagccctgtgcccggcttgggcctattaccaataccggctcgcggcgctg
ggcctgcccgatgccgccgaagacctcgacgcacgccagcgcggcagcctgatgcacgcc
gcgctggcgcggttgtggcaggcgctgcgcgactccaccaccctgcacgacctgagcgcg
gccgcgtgccaagccgccatcgagcaagcctgctgcggtgccctcgaggactacctagcc
aaacccgaccagccgccgttgtcggcgcggcggcgcgccctggagcagcgccgcttggag
cggctgctgcagcgctggctcgagatcgagcgcacccggggcagcggctttgcggtggtg
ggcatcgaaaaaaacgagaccgtggagctgtgcagcttgcagctcaagctgcaaatcgac
cgcatcgaccagctcgacgacggccggctgctggtgatcgactacaaaagcagcccaagc
atcgacacccgcaactggtccagccagcgcctgagcgaaccgcaactgccgctctacgcc
acctgcgccacgctgcccccagggcaggtggctggcgccctgtttgccaaggtgcggccc
gccgaccccggctgggccggtctggtggccgacgacgccgcccacccccagcccagcgcc
caaagcaccctgcgctgggacagcagccgcaaccgcgcgcgctacccacccacgcgcttc
cccggctgggaagcggtgctgcagcactggcgcgagcggctgcaggcgctggccgccgaa
gtgcgcgccggcgacgccgctgtgcgcttggccgacccggcgcagctgcgccactgcgag
gtcttgccgctgctgcgcctgagcgagcgccgcagccagtggctggcgctgcaggcccaa
gctaccgcaggcgcgcccatggcgtag
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