Serpentinimonas maccroryi: SMCB_2167
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Entry
SMCB_2167 CDS
T03627
Name
(GenBank) superfamily II DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cbab
Serpentinimonas maccroryi
Pathway
cbab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMCB_2167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbab03019
]
SMCB_2167
03400 DNA repair and recombination proteins [BR:
cbab03400
]
SMCB_2167
Enzymes [BR:
cbab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMCB_2167
Messenger RNA biogenesis [BR:
cbab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SMCB_2167
DNA repair and recombination proteins [BR:
cbab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SMCB_2167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAO84395
UniProt:
A0A060NSU0
LinkDB
All DBs
Position
complement(2339284..2341272)
Genome browser
AA seq
662 aa
AA seq
DB search
MAEAALAPLGALQPEPGLGLAPAAPEPGALAAPAAPAAQSATANRCLQVLQEVFGYPAFR
GAQAEIVAHLSDGGDALVLMPTGGGKSLCYQVPAIVRQRAGLGLTVVVSPLIALMHDQVG
ALLEAGVEAAYLNSSLSPQQASEVERRMLSGELTLLYAAPERLATARCMAQLQALYERGA
LSLFAIDEAHCVSQWGHDFRPDYRGLVALHERFPGVPRIALTATADALTRADIVEQLRLQ
QARAFVSSFDRPNIRYRIVEKKDSLQQLLRFIEREHSSVVNGQRQHDAGVVYCQSRRKVE
DVAAQLAAHGLQALPYHAGLDAAMRQRHQDRFLREDGLIMVATIAFGMGIDKPDVRFVAH
LDLPKNIEGYYQETGRAGRDGVAANAWMAYGLQDVIQQRSLIDASPAADEFKQVMRGKLD
ALLALAEASDCRRVRLLGYFGQGAQPCHNCDNCLAPPQTWDASEAARKLLSCIFRVQQAS
GGAFGAGHLIDILRGKLTEKVQQHGHQRLSTFGIGAELGESEWRSLLRQLIARTAVWVDG
AHFNTLRLGEGARAVLKGEQSVSLKLQTHTRTAPASTARARSAAHTLPLAARETLAALKA
WRAEVAREHNLPAYVIFHDATLEALAQRLPRTLADLQGIPGLGQKKLQAYGEEVLRVLER
RL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaagcggcgctggcacccttgggggcgctgcagccagagcccggccttggcttg
gcgccagcggcaccagagccgggcgcgctggcggcgcctgccgctcctgccgcccaatct
gccacggcaaaccgctgcctgcaggtgctgcaagaagtgtttggctaccccgccttccgg
ggcgcgcaagccgagatcgtggcgcatttgagcgacggcggcgacgcgctggtgctcatg
cccaccggcggcggcaaatcgctgtgttaccaggtgccggcaatcgtgcgccagcgcgcc
gggctggggctgacggtggtggtctcgccgctgatcgcgctcatgcacgaccaagtgggc
gcgctgctcgaggccggtgtggaagcggcttacctcaactccagcctgagcccgcagcaa
gccagcgaagtcgagcggcgcatgctcagcggggagctcacgctgctctacgccgccccc
gagcgcttggccacggcgcgctgcatggcgcagctgcaagcgctgtacgagcgcggcgca
ttgagcctgttcgccatcgacgaggcgcactgcgtgagccagtgggggcacgatttccgg
cccgactaccgcgggctggtggcgctgcacgagcgctttcccggcgtgccgcgcatcgcc
ctcaccgccaccgccgacgcgctcacgcgcgccgacatcgtcgagcagctgcgcttgcaa
caggcgcgcgccttcgtgagcagcttcgaccggcccaacatccgctaccgcattgtcgag
aaaaaggacagcctgcagcagctgctgcgcttcatcgagcgcgagcacagcagcgtggtc
aacggccagcgccagcacgacgcgggcgtggtctattgccagtcgcggcgcaaggtcgaa
gacgtggcggcgcagctggcggcgcacggcctgcaggcgctgccctaccacgccgggctc
gatgcggccatgcgccagcggcaccaagaccgctttttgcgcgaagacgggctgatcatg
gtcgccaccatcgcctttggcatgggcatcgacaagcccgacgtgcgcttcgtcgcccac
ctcgatttgcccaaaaatatcgagggctactaccaagagaccggccgcgccggccgcgac
ggtgtggccgccaacgcctggatggcctacggcctgcaagacgtgatccagcagcgcagc
ctgatcgacgccagcccggccgccgacgagttcaagcaggtcatgcgcggcaagctcgac
gccctgctggccttggccgaggccagcgactgccgccgcgtgcgcctgctgggctatttt
ggccaaggcgcgcagccctgccacaactgcgacaactgcctcgcgccgccccagacctgg
gacgccagcgaggcggcgcgcaagctgctatcgtgcatcttcagggtgcagcaggccagc
ggcggtgccttcggggccgggcacctgatcgacatcctgcgcggcaagctcaccgagaag
gtgcagcagcacgggcaccagcgcctgagcacctttggcatcggggccgagttgggcgag
agcgaatggcgcagcctgctgcgccagttgatcgcgcgcacggcggtgtgggtcgatggc
gcgcacttcaacaccttgcgcttgggcgagggcgcgcgcgccgtgctcaaaggcgagcaa
agcgtgagcctcaagctgcaaacccacacccgcaccgccccggccagcacggcgcgcgcg
cgcagcgccgcccacacgctgccgctggcggcgcgcgaaacgctggccgcgctcaaagcc
tggcgcgccgaagtggcgcgcgagcacaacctgcccgcctacgtgatcttccacgacgcc
acgctcgaggcgctggcgcagcgcctgccgcgcaccttggccgacctgcaaggcatcccc
ggcctagggcagaaaaaactgcaagcctacggcgaggaagtgctgcgcgtgctcgagcgc
cggctttga
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