Berryella intestinalis: JI75_00480
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Entry
JI75_00480 CDS
T03545
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cbac
Berryella intestinalis
Pathway
cbac00300
Lysine biosynthesis
cbac00470
D-Amino acid metabolism
cbac01100
Metabolic pathways
cbac01110
Biosynthesis of secondary metabolites
cbac01120
Microbial metabolism in diverse environments
cbac01230
Biosynthesis of amino acids
Module
cbac_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cbac00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JI75_00480
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JI75_00480
Enzymes [BR:
cbac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JI75_00480
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AJC11403
UniProt:
A0A0A8B3J1
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All DBs
Position
118950..120305
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AA seq
451 aa
AA seq
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MALPASDRSKQPDNRTAMELGAVLPLTAEVRGDHLFVGGIDMVELAREQGTALYVYDEAD
LRSRMSRYREAFAREYPDSGVLYASKAFMNKEVVRIAAEEGMELDVSGGGELAVAIAAGF
PMERVHVHGNNKTPQELLEAISAGVGIIVADSRIEAARISQIAGELGRTQRIYMRITPGV
EADTHEYIRTGCEDSKFGFTMLDDFAFKCVKDVMAMPNLDLVGFHCHIGSQIFALHSFDE
AAEVMIRFAARVKDAYGLEVSELDLGGGLGVAYVADDQPSTIEDFARITAESVKRHCAEL
GVSQPRLLVEPGRSLVATAGITLYTVGILKTLPGIRKYVAVDGGMSDNIRTALYHASYEP
VIANKASQPRTEIVTLCGKHCESGDAVVVDMPIQTPDLGDIVAVFGTGAYCYSMASNYNG
QPRPAIVFVKDGEARVVTRRETYADIMSRDL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcccgcatccgatcgctcaaagcaacctgacaaccgcaccgcgatggagctg
ggggcggttcttccgcttacggccgaggtgcgcggagatcacctgttcgtcggcggcatc
gacatggtcgagctcgcccgtgagcaggggacggcgctgtacgtgtacgatgaggccgac
cttcgttcgcgcatgtcgcgctaccgcgaggcgtttgcccgggaataccccgattcaggg
gtcctgtacgccagcaaggcgttcatgaacaaggaagtcgtgcgcatagccgccgaggag
ggaatggagctcgacgtgtcgggcggcggcgaactcgccgtggccatcgccgcgggcttt
cccatggagcgcgtgcacgtgcacggcaacaacaagacgccccaggagctgcttgaggcc
atttcggccggcgtcggcatcatcgtcgcagatagccgcatcgaggcggcgcgcatttct
cagatcgccggagagttggggcgcacccagcgcatctacatgcgcatcactccgggcgtc
gaggccgacacgcacgagtacatccgcaccggatgcgaagactcaaagttcggcttcacc
atgctggacgatttcgcgttcaaatgcgtgaaagacgtcatggccatgcccaacctcgat
ctggtcgggtttcactgccacatcggttcgcagatcttcgccctgcattcgttcgacgaa
gccgccgaggtcatgatccggttcgccgcacgcgtgaaggacgcgtacggcctcgaggtg
tccgagctcgatctgggaggcggcctgggtgttgcctacgttgccgacgaccagccctcg
actatcgaggatttcgcccgcatcacggcggagtcggtgaagaggcactgcgcggagctg
ggcgtctcccagccgcgcctgctggtcgaacccggccgcagcttggtggccaccgccggg
atcaccctgtacacggtgggcatcctgaaaacccttccgggcatccgcaagtacgtggcc
gtcgacggcggcatgtcggacaacatccgcacggcgctgtaccacgcttcctacgagccg
gtgatcgcgaacaaggcctcgcagccgcgcaccgagatcgtcacgctgtgcggcaagcac
tgcgaaagcggtgacgcggtggtcgttgacatgccgattcagacccccgacctgggagat
atcgtcgccgtgttcggcacgggggcatattgctatagcatggcatccaactataacggc
cagccccgtcccgcgatagtgttcgtgaaggatggagaggcgcgcgtggtgacgcgtcgc
gagacgtatgccgacatcatgagccgcgacctgtag
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