Berryella intestinalis: JI75_01195
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Entry
JI75_01195 CDS
T03545
Name
(GenBank) hypothetical protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cbac
Berryella intestinalis
Brite
KEGG Orthology (KO) [BR:
cbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbac03400
]
JI75_01195
Enzymes [BR:
cbac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JI75_01195
DNA repair and recombination proteins [BR:
cbac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JI75_01195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AJC11506
UniProt:
A0A0A8B200
LinkDB
All DBs
Position
280055..283711
Genome browser
AA seq
1218 aa
AA seq
DB search
MGLMPGQRECVDTLDRPVAVAAGAGSGKTFTLTKRIAHAVESGFVGGIDEVLAITFTTKA
AGELKARIKNELRAIGRIDQALLVDDAWISTIHGMCARLLRAHAVELGIDPCFSMADEPS
VARLKGEALEGALRRAEDRFGSEAVGALHDEYGAADGGVAALASELMGMALASEGGVSSL
VARTPRLSVHQAIAYLGECAASVAEVWVQLPETDKRIAPKLATLEAAERLEKLSCAPDPS
LIEALSIARDVVRVPGNCGAKFKDRAQRVDADFAYAVQTARLLHAAGSLSMLIAIAEDAS
ASFQRAKAELGVLDNDDLLVMAHRALVERPEIAARYEDRFKLVMIDEFQDTDQMQVDMIK
RLAGPGARRLCTVGDWQQSIYRFRGADVSVYRDHLEKVGTEGEGKVIELADNFRSHADVL
AFVDRVFEQPQVFGGRFMSLKPGRDESRVGRALPAGMPRVAVDLFSTQARVTHGTDVAAR
LRARRIAERFAAYREAGCAASDMVLLLGRMPKASMYADELRALGFNCVVAGGSVFSSSLE
ALEVASLLDALADEHDTQALYQVLTGTMFEVSTADLLYLGTACDEGEVRPRGIDRGLSDL
VRGVEPEGAVVSERLENARYVLGAARSMLGAHGVAQAVRFAFVESGLASRLQQRGGEGLA
SAGNMYKAIRIVEGLEASGAGAAEVAGLYRATIEGSRLSPGALSARVGDFVRIMTVHASK
GLEFPIVAISEMDERRRFSSPLRWVRLGGRMYLSLLAKDDRLAVPYAADLAAASCDFFDA
DDDEDGLARLVMEGDDAVAACEAMVRLNDVGETEEAKRLLYVGITRAKEAVILSMRGART
KERPEGSPGAGDPMSAVVPALAGPGGFFDQGETMLSYRGSQPAVVVHQSVPEKEVALDEI
FPPRDEDGVDTAEDAFIVPVHKPFKLPSYGTFEPVRSGFFSYSSLAHDAADGAPGAVDVA
ARYAVSVDGRKPVEGDLIDAADQGLFASADGQGKARERFGLSWSEGFLESEDDRAGFSVS
DSDKATDLGSAFHLLAQYAVDTRGADGITPPAPGLVRARADRFGLDRAETARIEAALGRW
ARSDVAREVEAFDRVRSEVPFACPLDLADGSRAILEGAIDLLAEDAASGRALIVDYKTGG
RPDEAPDALSRKHALQALCYAFVVLGQGYSEVEAVFVRVEQPREGAPDTPQCVRYRFTRD
DAEDLGVVVRGLIEQASV
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgggactgatgcccggacagcgggaatgcgtcgataccctcgatcggccggtggcggtg
gccgccggggcgggatcgggcaagaccttcaccctcaccaagcgcatcgcgcatgcggtc
gagtcggggttcgtgggcggcatcgacgaggtgctggccatcaccttcaccacgaaggcc
gccggcgagctgaaggcgcgcatcaaaaacgagttgcgtgcgatcggccgcatcgaccag
gctcttttggtggacgatgcgtggatatcgacgatccacggcatgtgcgcccggctgctg
cgcgcccatgcggtcgaactggggatcgacccgtgcttctcgatggccgacgagccctcg
gtcgcgcggttgaagggcgaggcgctcgaaggggcgctgcgccgtgccgaggaccgtttc
ggatcggaagcggtaggcgccctgcacgacgagtacggagcggcggacggcggggtcgcg
gccttggcgtccgagctgatgggcatggcgctcgcctccgagggcggggtgtcgtcgctg
gtggctcgcacgccgcggctgtcggtccatcaggcgatcgcctacctgggggaatgcgcg
gcctcggtggccgaggtgtgggtccagctgcccgaaaccgacaagcgcatcgcgccgaag
ctcgcgactctcgaggcggcggagcgcctggagaagctgtcgtgtgcgcccgatccgtcg
ctgatcgaggccctgtccatcgcgcgcgacgtggtgcgcgtgccgggaaactgcggtgcg
aagttcaaggaccgcgcgcagcgggtcgacgccgatttcgcctacgcggtccagaccgcc
cgcctgctgcatgccgccggctccctctccatgctgatcgcgatcgccgaggacgcatcc
gcgtcgttccagcgcgccaaggccgagctgggcgttctggacaacgacgacctgctggtc
atggcgcatagggccctggtcgagcgccccgagatcgccgcgcgctacgaggaccggttc
aagctggtgatgatcgacgagttccaggacaccgaccagatgcaggtcgatatgatcaag
cgcctggcgggcccgggtgcgcgccgcctgtgcacggtgggggactggcagcagagcatc
taccggttccgcggggcagacgtgtcggtgtaccgcgatcatctggaaaaggtcgggacg
gaaggcgaagggaaggtcatcgagctggccgacaacttccgcagccatgccgacgtgctg
gcgttcgtcgaccgcgttttcgagcagccgcaggtgttcggcggccggttcatgagcctc
aagcccggccgcgacgaaagccgcgtcggtcgcgcgctgcccgcgggcatgccgcgcgtc
gcggtcgacctgttcagcacgcaagcgcgggtgacgcacggaaccgatgtggcggcccgt
ctgcgggcccgtcgcatagccgagcgcttcgccgcctatcgggaggcggggtgcgccgcc
tccgacatggtgctgctgttgggccgcatgccgaaggcctcgatgtacgccgacgagttg
cgcgcgctcggtttcaactgcgtggtggcgggcggatcggtgttctcgtcctcgctcgag
gcgctcgaagtcgcctcgctgctcgacgcgctggccgacgagcacgacacgcaggcgctg
taccaggtcctcaccgggactatgttcgaggtttccacggccgacctgctgtatctggga
accgcgtgcgacgagggggaagtgcggccgcgcggcatcgatcgcggcctgtccgacctt
gtgcgcggcgtcgagcccgagggcgccgtcgtgtcggagcgcttggaaaacgcccggtac
gtgcttggcgcggcgcgctcgatgctgggtgcgcacggggtggcccaggccgtccgcttc
gcgttcgtggagtcgggtctggcctcccgcctccagcaacggggcggggaaggcctggcc
agcgcgggaaacatgtacaaagccatccgcatcgtcgaggggttggaggcttccggcgcg
ggtgcggcggaagtggccggactgtatcgcgcgaccatcgagggcagccggctttccccc
ggcgcgctctcggcgcgggtgggcgacttcgtccgcatcatgaccgtccatgcttcgaag
ggtctcgagttcccgatcgtggccatctccgaaatggacgagaggcgccgtttttcgtcg
ccgctgcggtgggtgaggctgggcgggcgcatgtacctgtcgctgctcgccaaggacgat
cgcctggcggttccctatgcggccgatctggccgccgcatcatgcgatttcttcgacgcc
gacgacgacgaggacgggctcgcccgcctcgtgatggaaggcgacgacgccgtggcggcc
tgcgaggccatggtcaggttgaacgatgtgggcgaaacggaggaggccaagcggctgctc
tacgtgggcatcacgcgggccaaggaggccgtgatcctatccatgaggggcgcgcgcacc
aaggagcgccccgagggatcgcccggtgcgggagaccccatgagcgccgtcgtccccgcg
ctggcggggccgggcggtttcttcgaccagggcgaaacgatgctttcgtatcgcgggtcg
cagcctgcggtggtggtccaccagagcgtccccgagaaggaggtggcgctcgacgagata
ttcccgccccgcgatgaagacggcgtcgatacagccgaagatgctttcatcgtgcctgtt
cacaagccattcaagctgccttcgtacgggacgttcgaacctgtgcgctcggggtttttc
agctactcgtcgcttgcccacgatgctgccgacggtgcgccgggcgcggtcgacgtcgcg
gcgcgctacgccgtatcggtcgatgggagaaaaccggttgagggcgacctcatcgacgct
gccgaccagggcctgttcgccagcgcggacggacagggtaaggcgcgggagcggttcggg
ctgtcgtggagcgagggtttcctcgaatcagaggacgatcgggcgggcttctcggtttcc
gattccgacaaggcgaccgatttgggctcggcattccacctgctggcgcaatacgcggtg
gatacacgcggcgcggacggcataacgccccccgcgcccgggctcgtgagggcccgcgcg
gatcgcttcggcctcgaccgcgccgaaaccgcgcggatcgaagcggccctggggcggtgg
gcgcgcagcgacgtcgcgcgcgaggtcgaggcgttcgaccgggtgagaagcgaggttccg
ttcgcctgccccctcgatctcgccgacgggtcccgtgcgatcctcgagggtgcgatcgac
cttctggccgaggatgcagcttcgggacgcgccctcatcgtggactacaagacgggcggc
cgtcccgacgaggcgcccgacgccctttcccgcaagcatgcgcttcaggcgctctgctat
gccttcgtggtgctgggtcagggatatagcgaggtcgaggccgtgttcgtgcgcgtcgag
cagccgcgcgagggcgcgcccgacacgccccagtgcgtgcgctaccgattcacgcgcgac
gacgcggaggatctcggggtcgtggtgcgcgggctaatcgagcaggcgtccgtctag
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