Berryella intestinalis: JI75_01945
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Entry
JI75_01945 CDS
T03545
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
cbac
Berryella intestinalis
Pathway
cbac00550
Peptidoglycan biosynthesis
cbac01100
Metabolic pathways
cbac01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cbac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JI75_01945
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JI75_01945
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbac01011
]
JI75_01945
Enzymes [BR:
cbac01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JI75_01945
Peptidoglycan biosynthesis and degradation proteins [BR:
cbac01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
JI75_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AJC11631
UniProt:
A0A0A8B2D6
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All DBs
Position
466771..468936
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AA seq
721 aa
AA seq
DB search
MLVAIVVAILTLIVAALVAVAFFALRERLRTSSSVHVKRGRASISSIDTLDVASASSSTD
GLPDTHVKTSSSPDGRASAPLNARFAAIGVFAAGVFATLGAKLFGMQILQASSYQKQANE
NKYTDVSTPAPRGYIYDADGVALVKNRSSLTVLADADVLSDHDVVLRLSAVLGIPYNVVR
SRLQDTSSGAQSQRVIASDASLRNVAFIAEHSDAFPGVNIQNRTIRSYPYGALAAHVLGY
TGAVSDADLKSVPANRDIELGDEVGKSGVEYTYDEILSGEHGRRRVVADADGNVVRVVAE
TQPTRGSDLYLTIKAPVQYVVDKELAELIAPKGVIGTGKGVAGACVVMDVTDGSIVAMSS
YPTYSPETFIGGISQDIWDLYSSKSSYYPLLNRTISGTYAAASTFKSFTGLAALRYGFAD
TSKYWTCTGSWDGFNTGSPQKCWLKTGHGSLDFKGGIVQSCDVVFYDIAYNFYYAGKSQG
GTLSDTAMQEEPAKFRFGQLTGIDLASEEAGRIPTPEWKQSYWADVPTEGVWRGGDMTNT
VIGQGDVLVTPIQVAVAYGAIATGNLMRPHVLKEVRNGDNVAAVTFEPQIIDVPDVDEKN
YAILRDALNGVAGSNSALAKSFRDVGMDPWDVACKTGTAEMTDTEDFGWFACYAPYDDPK
YVVAVMIEQGGGGSTSAGPIGAKALAAALAADAGELKEVGAVAASSGESVAYVSSSSGRT
D
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcgccatcgtcgtcgccatcctcacgctgatcgtcgccgccctggtcgcggtg
gcgttcttcgcgctgcgcgagaggctgcgcacctcgtcgtctgtgcatgtgaagcgcggg
cgggcctcgatcagctccatcgacaccctggacgtcgcgtcggcgtcctcgtcgaccgac
ggccttcccgacacgcacgttaagacgtcttccagtcccgacggccgcgcgtcggctccc
ctgaacgcgcgtttcgccgcgatcggcgtattcgccgcgggcgtgttcgccactttgggc
gccaagctgttcggcatgcagatcctccaggcctcgtcgtatcagaagcaggccaacgag
aacaagtacaccgacgtgtccacccccgctccgcgcggatacatctacgatgccgacggg
gtggccctggtgaagaaccgctcgtcgctcaccgttctggccgatgccgacgtgctgtcc
gaccacgatgtggtcctgcgcttgtcggcggtgctgggcattccctacaacgtggtgagg
tcccgcttgcaggacacttcgtcgggcgcgcagagccagcgcgtcatcgcaagcgacgcg
tcgcttagaaacgtcgccttcatcgccgagcattccgatgcgtttccgggcgtcaacatc
cagaaccgcacgatccgcagctatccgtacggggccctcgcggcccacgtgctgggctac
acgggggccgtgtccgacgccgacctgaagtccgttccggcgaaccgcgacatcgaactg
ggcgacgaggtgggcaaaagcggcgtcgagtacacctatgacgagatcctttcgggcgag
cacggccgtcgccgcgtcgtggcggatgccgacgggaacgtggtacgcgtggtggccgag
acgcagccgacgcgcggaagcgacctgtacctcaccatcaaggctccggtccagtacgtg
gtggacaaggagctcgccgagctcatcgcccccaagggcgtcatcggaacgggcaagggc
gtggccggggcctgcgtggtcatggacgtgaccgacggctcgatcgtggccatgtcgagc
taccccacgtattccccggagaccttcatcggcggcatctcgcaggatatatgggatctg
tactcgtcgaagtcctcgtactacccgctgctgaaccgcaccatttcgggaacgtacgcg
gcggcctcgacgttcaagtcgttcacgggcctggcggcgctgcgctacgggttcgccgac
acctcgaagtactggacctgcacgggctcgtgggacgggttcaacaccgggagcccccag
aaatgctggctgaagacgggccatggcagcctggatttcaaaggcggcatcgtccagtcg
tgcgacgtggtgttctacgacatcgcgtacaacttctactacgcgggcaagagccaggga
ggcacgctgtcggacaccgccatgcaggaagagcccgcgaaattccgtttcggccagctt
acggggatcgatctcgcatccgaggaggcgggccgcatccctactcccgagtggaagcag
tcgtactgggccgatgttcccaccgagggcgtgtggcgcggaggcgacatgaccaacacc
gtcatcggccagggcgacgtgctggtgacgccgattcaggtggccgtggcgtacggcgcc
atagccacgggcaacctcatgaggccccatgtgctcaaagaggtgcgcaacggggacaac
gtggcggccgtgaccttcgagccccagatcatcgacgttccggacgtcgatgagaagaac
tacgccatcctgcgcgacgcgctgaacggcgtcgccggatcgaactcggcgctggccaag
tccttcagggacgtcggcatggacccctgggacgtcgcctgcaaaaccggtaccgccgag
atgaccgacaccgaggacttcggctggttcgcctgctatgctccctacgacgacccgaaa
tacgtggtggccgtcatgatcgagcagggcggtggcggatcgacgtctgccggtcccatc
ggagccaaggcgctcgctgcggcgctggccgccgatgcgggcgagctcaaagaggtgggg
gccgtcgcagcttcgagcggcgagtcggtcgcctacgtgtcatcttcgtccggacgaacc
gactag
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