Berryella intestinalis: JI75_03815
Help
Entry
JI75_03815 CDS
T03545
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cbac
Berryella intestinalis
Brite
KEGG Orthology (KO) [BR:
cbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbac03016
]
JI75_03815
Enzymes [BR:
cbac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JI75_03815
Transfer RNA biogenesis [BR:
cbac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JI75_03815
Prokaryotic type
JI75_03815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AJC11921
UniProt:
A0A0A8B358
LinkDB
All DBs
Position
830991..831992
Genome browser
AA seq
333 aa
AA seq
DB search
MKRAATDYSLLVAVDKPQGMSSHDVVNRCRRIFGEKRVGHTGTLDPLATGVLPICIGPAT
RLDRFMVGHDKSYDVRIAFGYETSTDDREGEPTVVCPVSARLSSESFARRVLETQVGPQM
QVPPQYSAVKIDGKPAYARARAGAEVELAARAVEVYAADLLGISHDDETDLVFWDVRFSV
SKGTYIRSLARSVGRVAQCPAHVFELRRIQAGSIRLEDCVTLDRLEDVRERAALDPVAVL
GYRFAFADDRESLVRNGGRFAARDLELFDLAPRPILEAGSLCSSAFEPSCKRPEPGEVVA
LVARGSLIALYEFDSDRGCWKSCCGFSVGVSRG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgcgccgcgaccgattactcgcttctggtggccgtcgacaagccccaggggatg
tcctcccatgacgtggtgaaccggtgccgccgcatcttcggcgagaagcgcgtcgggcac
accggaacgctcgatcctctggcaacgggggtcctgccgatatgcatcggcccggcgacg
aggctcgacaggttcatggtgggccacgacaagtcctacgacgtgcgcatcgccttcggg
tacgagacctcaaccgacgatcgcgagggggagccgaccgtcgtgtgccccgtatcggcg
cggctctcgtcggagtcgttcgcccgccgtgtcctggagactcaggtcggcccccaaatg
caggtgccgccccagtacagcgccgtgaagatcgacggcaagccggcctacgcgcgggcg
cgcgccggcgccgaggtggagcttgcggcgcgcgcggtggaggtgtacgcggccgatctt
ctggggatatcccacgacgatgagaccgacctcgtgttctgggacgtgcgcttctcggtg
tcgaagggcacctacatccgctcgctcgcccgatcggtggggcgcgtcgcccagtgcccg
gcgcacgtgttcgagctgcggcgcatccaggcgggctcgattcggctcgaagactgcgtg
acgctcgatcggttggaagatgtccgggagcgggccgccctcgatccggtcgcggtcctg
ggatatcggttcgccttcgccgacgatcgggagtccctcgtgcgcaacggggggcgcttc
gccgcgcgcgacctcgagctgttcgatctcgccccgcgcccgatcctcgaagcgggttcg
ctgtgctcctcggcgttcgaacccagctgcaagcggcccgagcccggcgaggtcgtcgcg
ctggttgcgcgcgggtcgctgatcgccttgtacgaattcgattcggatcgcggctgctgg
aaatcgtgctgcggcttttctgtgggggtatcgcgtggctga
DBGET
integrated database retrieval system
