KEGG   Berryella intestinalis: JI75_06065
Entry
JI75_06065        CDS       T03545                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cbac  Berryella intestinalis
Pathway
cbac03030  DNA replication
cbac03410  Base excision repair
cbac03420  Nucleotide excision repair
cbac03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cbac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JI75_06065
   03410 Base excision repair
    JI75_06065
   03420 Nucleotide excision repair
    JI75_06065
   03440 Homologous recombination
    JI75_06065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbac03032]
    JI75_06065
   03400 DNA repair and recombination proteins [BR:cbac03400]
    JI75_06065
Enzymes [BR:cbac01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JI75_06065
DNA replication proteins [BR:cbac03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     JI75_06065
DNA repair and recombination proteins [BR:cbac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     JI75_06065
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     JI75_06065
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_2 DNA_polI_exo1 HHH_5
Other DBs
NCBI-ProteinID: AJC12287
UniProt: A0A0A8BAU0
LinkDB
Position
complement(1336595..1339228)
AA seq 877 aa
MSKKIAVIDGNSLMHRAFHAVPPTMAAPDGTPTNAVFGFMSMLLKFIETMRPDAIVCAFD
AGKPQFRIEAMEQYKAQRPPMDDDLRAQFPLIEGLLEAMDVPVVKVRGWEGDDILGTVAA
RNERLGFETLLVTGDKDAYQLVSAATSVVTTKKGVTDIVVYTPAEVEERYGVTPAQFPDF
LGFMGDSSDNIPGVPGIGAKTAAKLLQRFGSMEGVYDNLDQLKGKQLENIRDNRDGAFLS
RTIATIVTDLDFELDLEGVSFPSYDAERVASAFGALRFNTHLDRLVKVCGLAAAPIGSAF
SPFVPLEGAEAEAFVRDAIEAGERLGVSFVCPDQQSLLPEPATGAFSTKTAAALVEGDAA
LALFADVVRKGAFSALDAKRSIQEVYPADSARAALVSDAEVLAMDAFDLGLAGYLLNSST
SSYSAAELARDYLDAVVAEPADDRERSLVEAQIAAALVEPLSERLGEDGSAGVFSDIDSP
LVAVLAIMERTGAPIDSAALKAIGDVTQVEIDELRRRIIELAGEDFNVDSPKQLARILFE
VLELPHGKKTKSGYSTDAKVLKQLAGTHEMPALVLQYREYAKIKSTYIDALPRIAADSDD
GRVHSSFNQTVTTTGRLSSSDPNLQNIPVRTEFGRKIRSCFTGIGPGDLFMSADYSQIEL
RLLAHLSEDPHLIEAFRSGEDFHASTAARVFGVEVADVTPEMRSRAKAVNFGIVYGQQAF
GLAQTLDIPVYEAREMIDRYFEAYPGVRSYLDETIERARACGYAETMFGRKRHIPELAAK
NAVQRGFGERTAMNHPMQGSAADIIKLAMVGVQHLLEESRTSARLLVQVHDELDFSVPAE
EAPSLAAAVKEAMEGVVSLKVPLIAEVSSGRTWAEAH
NT seq 2634 nt   +upstreamnt  +downstreamnt
atgtccaagaaaatagcggttatcgacggcaattcgctcatgcaccgggcgttccatgcg
gtgccgcccacgatggccgcacccgacgggacccccaccaacgcggtgttcgggttcatg
tccatgctgctgaaattcatcgagacgatgaggcccgacgccatcgtctgcgccttcgac
gcgggcaagccccagttccgaatcgaggcgatggagcagtacaaagctcagcgccctccc
atggacgacgatctgcgcgcccagttcccgctgatcgaggggctgctcgaggccatggac
gtcccggtggtgaaggtgcgcggctgggagggagacgacatcctgggcacggttgccgcc
cgaaacgagcgactggggttcgagacgctgctggttacgggcgataaggacgcctaccag
ctggtgagcgcggctaccagcgtggtcaccacgaagaagggcgtgaccgacatcgtggtg
tacaccccggccgaggtcgaggagcgctacggcgtcacgccggcccagttccccgacttt
ctgggcttcatgggcgactcgtccgacaacatccccggggttcccggcatcggagcgaag
accgcggccaagctgctgcagcgcttcgggtcgatggagggcgtctacgacaacctcgac
cagctcaaaggcaagcagctcgagaacatcagggacaaccgcgacggggcgtttctcagc
cgcacgatcgcgaccatcgtcaccgacctggacttcgagctcgatctggagggggtttcg
tttccctcctacgacgcggagagggtcgcgtcggcgttcggcgccctgcggttcaacacg
catctggaccgcctggtgaaggtgtgcggacttgcggcggcgccgatcgggtcggcgttt
tcccccttcgtccccttggagggcgccgaagccgaggcgttcgtgcgcgacgcgatcgag
gcgggggagcgcctgggcgtttcgtttgtctgccccgaccagcaaagcctgctccccgag
cccgcgacgggcgcgttttccaccaagacggctgcggcgctcgtcgagggcgacgccgcg
ctcgcgctgttcgccgacgtcgtgaggaaaggcgcgttttccgccctcgacgcgaagagg
tcgatccaggaggtctacccggccgactcggcccgcgcggcgctcgtgagcgacgccgag
gtgctggcgatggatgcgttcgacctcgggctggccgggtacctcctgaactcgtccacc
tcgtcgtattcggcggccgagctggcgcgcgactacctcgatgcggtcgttgccgagccc
gccgacgatcgggagcggtcgcttgtcgaagcgcagatcgccgccgcgctcgtggagcct
ctgtccgagcggctgggagaagacgggtcggccggggtgttctccgacatcgattcgccg
ctggtggcggtgctcgccatcatggagcgcacgggagcgccgatcgactccgccgcgctc
aaggcgatcggcgacgtgacccaggtcgagatcgacgagctgcgccgccgcatcatcgag
ctggcgggcgaggacttcaacgtcgattcgcccaagcagctcgcccgcatcctgttcgag
gtcctggagcttccccacggcaagaagaccaagagcggctattccaccgatgcgaaggtg
ctcaagcagctggccggaacgcacgagatgccggcgctcgtcctgcagtaccgcgagtac
gccaagatcaagtcgacctatatagatgcgcttccccgcatcgcggcggacagcgacgac
gggcgcgtccattccagcttcaaccagacggtcacgacgacggggcgcctgtcctcctcc
gatccgaacctgcagaacatccccgtccgcaccgagttcgggcgcaagatccgctcgtgc
ttcaccggcatcgggcccggcgatctgttcatgtcggccgactactcccagatcgagctg
cggctactggctcatctgagcgaggatccccatctcatcgaagcgttcaggtcgggcgag
gacttccacgcctcgacggccgcccgcgtcttcggcgtcgaggtggccgacgtcaccccc
gagatgcgttcgcgcgccaaggcggtcaacttcggcatcgtctacggccagcaggcgttc
ggcctggcgcagacgctcgacatccccgtgtacgaggcccgcgagatgatcgaccggtac
ttcgaggcgtacccgggcgtgaggagctacctcgacgagaccatcgagcgcgcgcgggcg
tgcggctatgccgagacgatgttcggccgcaagcggcacatccccgagctggctgcgaaa
aacgcggtccagcgcgggttcggcgagaggacggccatgaaccatcccatgcaggggagt
gcggccgacatcatcaagctcgccatggtcggggtccagcacctgctcgaggaaagccgg
acgagcgcgcggctgctggtgcaggtgcacgatgaactggacttctccgtccccgccgag
gaggcgccgtctttggcggcggccgtgaaagaggcgatggagggcgtcgtttcgctgaag
gtccccctgatcgccgaggtttcgagcgggcgaacctgggccgaggcccactag

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