KEGG   Berryella intestinalis: JI75_07070
Entry
JI75_07070        CDS       T03545                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
cbac  Berryella intestinalis
Pathway
cbac03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cbac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    JI75_07070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbac03021]
    JI75_07070
   03400 DNA repair and recombination proteins [BR:cbac03400]
    JI75_07070
Enzymes [BR:cbac01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     JI75_07070
Transcription machinery [BR:cbac03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     JI75_07070
DNA repair and recombination proteins [BR:cbac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      JI75_07070
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2 AMIN-like SAM_EPH HHH_5 DUF3271
Other DBs
NCBI-ProteinID: AJC12459
UniProt: A0A0A8B529
LinkDB
Position
complement(1568508..1569458)
AA seq 316 aa
MTEFMRPTVTTEEVSDTLARFIVEPLERGYGNTLGNSLRRVLLSSLDGARATAIQIEGVQ
HEFTTAEGVIEDITDIVLNVKGLVFQALNSDIEQAIAHVSVEGPCVVTGADLEVPTEFTL
INPEHVIATVADGGQLEMSVRIGVGRGYVSAERNKRTEDPIGIIHVDSLFSPVRRCTMNV
VNTRVGQRTDYDKLVLEVETDGSSTPVEAVLRAVNIINQYMGAFMVLSGDEEEEEMEIPS
IFTPEGQETNVELDKQIEDLDLSVRSYNCLKRAGIHSVRQLVEFSENDLLNIRNFGAKSI
EEVKDKLISMGLNLKL
NT seq 951 nt   +upstreamnt  +downstreamnt
atgacagagttcatgaggcctacagttacaacggaagaagtgagcgacaccctcgctcgt
ttcattgtcgagccgctcgagcgcggctacggcaacactctgggcaactcgctgcgtcgc
gttctgctttcgtctttggacggcgcgcgtgcgacggcgatccagatcgagggcgtgcag
catgagttcaccaccgccgaaggcgtcatcgaagacatcaccgatatcgttctgaacgtg
aagggcctggtcttccaggctctcaactccgacatcgagcaggccatcgcccatgtgtcc
gtcgagggcccctgcgtcgtgaccggagccgacctcgaagttcccaccgagttcacgctg
atcaaccccgagcacgtcatcgcgacggtcgccgatggcggccagctcgagatgagcgtc
cgcatcggcgtgggccgcggctacgtttcggccgagcgcaacaagcgcaccgaggacccc
atcggcatcatccatgtcgactcgctgttctcgccggtgcgccgctgcaccatgaacgtg
gtcaacacccgcgtcggccagcgcaccgactacgacaagctggtcctcgaggtcgaaacc
gacggatcttccacccccgtcgaggcggtcctgcgcgcggtgaacatcatcaaccagtac
atgggcgccttcatggtcctttccggagacgaagaggaagaggagatggagatcccctcg
atcttcacccccgagggccaggagaccaacgtcgagctcgacaagcagatcgaggatctg
gacctttccgtccgctcctacaactgcctgaagcgcgccggcatccattccgtgcgccag
ctggtcgagttctccgagaacgacctgctgaacatcaggaacttcggcgccaagtccatt
gaggaagtgaaggacaagctcatctccatgggcttgaacttgaagctatag

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