KEGG   Chitinophaga caeni: COR50_00780
Entry
COR50_00780       CDS       T05360                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
cbae  Chitinophaga caeni
Pathway
cbae02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cbae00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    COR50_00780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbae03021]
    COR50_00780
Transcription machinery [BR:cbae03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     COR50_00780
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_Mga GerE HTH_40 HTH_24 HTH_23
Other DBs
NCBI-ProteinID: ATL45809
UniProt: A0A291QP80
LinkDB
Position
185764..186336
AA seq 190 aa
MIQRKINELFVDMATNNDEESFRLLYDHCFVRVLRFSYSLTRSREVAEEITNDVFLHCWQ
KRASLQHIRNPEVYLFVVARNKAIDFRRKQANFHHVDLLEDIHVEIALESNPEEMMISAE
MVRRLELSIEQLPPKCKMIYLLIKQYGLKYQEVANILNLSIKTVENQLSIAVKRLTTAVK
FSFEKEEHHK
NT seq 573 nt   +upstreamnt  +downstreamnt
atgattcaacgaaaaattaacgagttatttgttgatatggcaacaaacaatgacgaagag
tcttttaggctcctgtatgatcattgttttgtacgcgttcttaggttttcatatagcctt
accaggtcgcgggaagtggccgaagagattacgaatgacgtgtttttacactgctggcaa
aagcgcgcctccctgcaacatatccgtaacccggaagtgtacctgttcgttgttgccagg
aataaagctatcgatttcaggaggaaacaagcgaattttcaccatgtagatttattggag
gatatacatgttgagatcgcgttggaaagcaacccggaagaaatgatgatatcagccgaa
atggtgcgtagattggagctgagcatcgagcagctcccgcccaaatgcaaaatgatttac
ctgctcataaagcaatacggccttaaataccaagaagtagctaacatcttgaacctttct
atcaagacggtggaaaaccagttatcaatcgcggttaagagattaacaacagccgtgaag
ttcagcttcgaaaaagaagagcatcataaataa

DBGET integrated database retrieval system