KEGG   Chitinophaga caeni: COR50_02340
Entry
COR50_02340       CDS       T05360                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
cbae  Chitinophaga caeni
Pathway
cbae03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cbae00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    COR50_02340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbae03400]
    COR50_02340
DNA repair and recombination proteins [BR:cbae03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     COR50_02340
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      COR50_02340
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N nSTAND1 AAA_29 AAA_21 AAA_16 RsgA_GTPase nSTAND3 nSTAND6 DnaJ_CXXCXGXG AAA_22 ATPase_2 Viral_helicase1 AAA_15 AAA_23
Other DBs
NCBI-ProteinID: ATL46096
UniProt: A0A291QQ78
LinkDB
Position
complement(582593..585472)
AA seq 959 aa
MAKIKKLDQVEPAPSRSTEDLIEVYGAREHNLKNLDIRLPKNKLVVITGISGSGKSSLAF
DTIYAEGQRRYMESFSAYARQFIGDMERPDVDKITGLSPVISIEQKTTNKNPRSTVGTIT
EVYDFLRLLYARIGLAYSYETGKKMTRFSEDEILEHIYKNKEKKKLIILAPLVRGRKGHY
RELFEQVRKQGYLKVRIDGEIVDLKERLQVDRYKIHDIELVVDRVQVTPDAKSRISQSVQ
KALQIGKGLMFVLDHDTNKSTQYSKQLMCEDTGLSYEEPSPNTFSFNSPYGACPRCKGLG
TIYQVDMNEVIPDYSKSIQDGGLVPLGEARDTFTYKQVQQLAKKYKFSLTKPISEIPREA
LNLLLFGDVNGSLNTEVALDEESTINVSAEYEGVVNMVRRYFNDTSSDHVRNWAEGFMKL
STCPTCDGARLKKESLFFRVDNKNISELGNMDLSHLATWFENIEERLDNKQNVIAKDILK
EIRERVGFLLNVGLTYLTLNRPTRTLSGGESQRIRLATQIGSQLMGITYILDEPSIGLHQ
RDNMQLIEALKNLKEMGNTVIVVEHDKDIMLHADHLVDIGPGAGKHGGEVVAQGKPTDML
KMKTATAGYLSGKTGAPIPEERRKGNGKFLELKGVTGNNLKNVSVKFPLGTFMCVTGVSG
SGKSTLINETLYPILSKHAYNSKKEPMPYKSIKGLENIDKVIEIDQSPIGRTPRSNPATY
CGFFTDIRTLFAQVPEAKIRGYNAGRFSFNVKGGRCDVCEGAGVRVIEMNFLPDVMVHCE
KCNGRRYNRETLEIRYKGKSISDVLDMTVDEAVEFFQPVPYIHRKVKTLQDVGLGYISLG
QSAVTLSGGEAQRVKLSTELSKKDTGKTIYILDEPTTGLHFQDIQMLLKVLNKLVDRGNT
VLVIEHNLDVIKMADYIIDLGPEGGEGGGQILCTGTPEVVSKCKESHTAKFLAQELRIK
NT seq 2880 nt   +upstreamnt  +downstreamnt
atggcaaaaataaaaaaattagatcaggttgaacccgctccttccagaagtacagaggat
ctgatagaagtttacggcgctagggaacataatttgaaaaacctggatatccgtcttcca
aagaataaattggtagtcattaccggtatcagcggcagcggtaaatcttcattggctttt
gatactatttatgccgaggggcagcgtaggtatatggaaagcttttctgcttatgcccgc
cagtttataggcgatatggaaaggccggatgtggataagatcaccgggctctcccccgtt
atttctatcgagcaaaaaactacgaataaaaatccccgttctactgtaggaaccatcacc
gaagtgtacgattttctccgcttgttgtatgccaggatcggcctggcttattcctacgaa
acgggaaagaaaatgacccgcttttcggaagatgaaatccttgagcatatatacaaaaat
aaggaaaagaaaaagttgatcatcttggctcccttggtgcgtggccgtaaaggtcattac
cgcgaattgtttgaacaagtgcgcaaacagggatatctcaaggtgcgtatcgatggagaa
attgtggatttgaaagaaaggttgcaagtggatcgctacaagatacatgatatcgaatta
gtcgtagaccgcgtacaggtaactcctgacgctaagagcaggatcagccagagtgttcaa
aaagccttgcaaataggtaaaggtttaatgttcgtactggatcatgataccaacaaatcc
acgcaatacagcaagcagttaatgtgcgaagatacgggcttgtcttacgaggagccttcc
ccgaatacgttctctttcaattcgccctacggcgcttgcccgagatgtaaaggcttggga
accatttaccaggttgatatgaacgaggtaattccggattattccaaatcgatccaggac
ggaggtttagtgccattaggagaagccagggatacgtttacttacaaacaagtacaacag
ttagcgaagaaatataaattctcgttgacaaaacccatctcggaaatacccagggaagcc
ttaaacctattgttgttcggtgatgtgaacggtagcctgaatacggaagtagcgctcgat
gaagaatctacgatcaatgtatctgccgagtatgaaggcgtagtgaacatggtgcgcagg
tattttaatgataccagcagtgatcatgtccgaaactgggccgagggttttatgaaactg
agtacttgtcccacttgtgatggtgcaaggttgaaaaaggaaagtttgttcttcagggtc
gataacaaaaatatttcggaactgggtaacatggatctcagtcacctggctacctggttt
gaaaatattgaagagcgcttagacaataagcaaaatgtcatcgccaaggatatcctgaaa
gaaatccgcgaaagggtcggttttttattgaatgttggattaacatatttaacgctcaat
aggcccaccaggaccttgagcggtggagaatctcaaaggattcgtctggctacgcaaatt
ggttcccaattaatgggcatcacttatatcctcgatgaaccgagcatcggtttgcatcag
cgggataatatgcagttgatcgaagcattgaaaaacctcaaagaaatggggaatacggtt
atcgtcgtggaacatgataaagatatcatgctgcatgccgatcacctggtggacatcggt
cccggcgcaggcaaacacggcggagaagtggtggcacaggggaagcctaccgatatgctg
aaaatgaaaaccgccacggcgggctatctcagcggtaaaacaggggcgcccatcccggaa
gaaaggcggaagggaaacggcaagttcctggagctgaaaggcgtaaccgggaataatttg
aaaaatgtatccgtcaagtttccattgggtactttcatgtgtgtgacgggtgtttccggt
agcggtaaatccacgttgatcaatgaaaccctgtacccgattctatccaagcacgcttat
aattccaagaaggaaccgatgccgtacaaaagcatcaagggcttggaaaatattgataag
gttattgaaatagatcaatcaccgatcggtaggacgccaaggagtaatcctgctacatat
tgcggcttttttaccgatatccgtactttatttgcacaggtgccggaagctaagatccgc
gggtacaatgcaggccggttttcgtttaatgtgaaaggcggtcgctgtgatgtatgtgaa
ggtgcaggtgtcagggtaattgaaatgaatttcctgccggatgtaatggtgcattgtgaa
aaatgtaacggaaggaggtataaccgggaaactttggagatccgttataaaggtaaatcc
atttccgatgtgttggacatgacggtagatgaagccgtggaatttttccaaccggtgcct
tacatccaccgtaaagtgaaaacattgcaggatgtcgggctggggtatatttcattaggt
caatccgcggtgactttatccggaggtgaggcccagcgggtaaaattatccaccgaatta
tcgaaaaaagataccgggaaaacgatctatattctcgatgaacctactacgggtctgcat
tttcaagatatccagatgttgttgaaagtgctgaataagttggtagatcgcggaaatacg
gttttggtgatcgaacacaacttggatgtcatcaagatggcggattatatcatcgacttg
ggccctgaaggtggcgaaggtggcgggcagatcctgtgtacgggtacgccggaagtggtg
agtaaatgcaaagaaagtcataccgctaaatttttagcccaagaattacgcatcaaatag

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