KEGG   Chitinophaga caeni: COR50_03490
Entry
COR50_03490       CDS       T05360                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cbae  Chitinophaga caeni
Pathway
cbae03420  Nucleotide excision repair
cbae03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cbae00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    COR50_03490
   03430 Mismatch repair
    COR50_03490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbae03400]
    COR50_03490
Enzymes [BR:cbae01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     COR50_03490
DNA repair and recombination proteins [BR:cbae03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     COR50_03490
   MMR (mismatch excision repair)
    Other MMR factors
     COR50_03490
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 AAA_12 PcrA_UvrD_tudor ResIII AAA_11 DEAD ATG1-like_MIT2
Other DBs
NCBI-ProteinID: ATL46311
UniProt: A0A291QQW6
LinkDB
Position
complement(849611..851941)
AA seq 776 aa
MNANYLDELNDRQREAVSHINGPLMIVAGAGSGKTKVLTTRIAHLMNNGVDAFNILALTF
TNKAAREMKERIERILGGHEARNLYIGTFHSVFARLLRTDAPKMGYPNDFTIYDADDAKS
VVKTIINELNLDDKHYKPNLVYNRISAAKNSLMSPQEYQHDYYIQQEDQRSGRPMIGKIY
DMYAKRCFKNGAMDFDDLLYKFYVLLKSFPEVLSKYQHKFRYIMIDEYQDTNPAQYEIIK
LLGAVHENIAVVGDDAQSIYSFRGATIQNILQFEKDYDDVKVVKLEQNYRCTKSILDVAN
QVIKNNKGQIEKSLWTDNDQGEKIRLVRTSTDNEEGKFVADTIAEQKLRNHYSNREFAIL
YRTNAQSRAFEESLRRMNIPYRIYGGLSFYQRKEIKDFVAYLRVIINPRDEEALKRIINY
PARGIGKTTIDKLTLLSNTHDLTFWEVLSSAGNFGFRSGTLEAIDGFVTMIKSFQSQLEK
SNAYDVAVQVGKSTNIVKELFNDKTTEGLARYENVQELLNSIKEFTETPTEDGELLEKTL
GAYLQQITLLTDADQGNDEDSDVVKLMTIHAAKGLEFPVVFSVGLEETLFPNSMAINSRE
ELEEERRLFYVAITRAKSKLWITYANSRYRFGNLVQNESSRFIDEIPPQHLDRSYAGGGV
RNMGSTPSWGGGNGLFDRSNRKPAPGHKTTTSIGTNPNPGPRPATTVTNHVPTEGFAPDD
PVNMEVGMKVEHQKFGFGTITSMDGAPNNRIATVNFPAAGGDKKIMLNYAKLMIIK
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgaatgcaaactacctcgatgaactgaatgatcggcagcgtgaagccgtttcccatatc
aacggtccgcttatgattgttgcaggtgctggatctggtaaaactaaagtactcacaaca
cgtatcgcgcacctaatgaacaatggtgtggatgcttttaatatcctagcgttaaccttt
accaacaaggccgccagggaaatgaaagaacgtattgaaaggatcttgggtggacatgaa
gcccgtaacttatatatcggtactttccactccgtatttgcccgtttacttaggacggat
gcacccaaaatgggctatccgaacgattttaccatatacgatgcagatgatgccaagagt
gtcgttaaaaccatcatcaacgagttgaacctcgatgataaacattataaacccaacttg
gtatacaaccgtatctcggctgctaaaaacagccttatgagcccgcaagaataccagcat
gattattatatccagcaggaagatcaaagatccggcagaccgatgatcggcaagatttac
gatatgtatgccaagcgctgctttaaaaatggcgcgatggatttcgatgacctgctttac
aagttttacgtgctgctcaagagtttcccggaagtgctgagcaaataccagcacaagttc
cggtatatcatgatcgatgagtatcaggatacgaaccccgcgcagtatgaaatcatcaag
ctgttgggcgccgtacatgaaaatattgcagtcgtgggagatgatgcccaaagtatctat
tctttccgcggggctaccatccagaatattttacagttcgagaaagattatgatgatgtg
aaagtggttaagcttgaacaaaactaccgctgtaccaaatcgatcctcgacgtggccaac
caagttattaaaaacaataagggccagatcgagaaaagcctgtggacggataatgaccag
ggcgaaaaaattcgattggttcgtacttcgacggataatgaagaaggtaaattcgtagcg
gatactatcgcggaacagaagttgagaaaccattattccaaccgggaatttgccatatta
taccgcaccaacgcgcaaagccgtgctttcgaggaaagcttgcggaggatgaatatcccc
taccgcatttacggtggattgtcgttttaccaaagaaaagaaatcaaggacttcgtagct
tatttaagggtgatcatcaacccgcgagatgaagaagcgttaaaaaggattatcaactac
ccagccaggggcatcggtaaaacgacgatcgataagctgacgttgttgagcaatacccat
gaccttactttttgggaagtattatccagcgccggtaatttcggattccgctccggtacg
ctcgaagcgattgatggtttcgtaactatgatcaaaagcttccaaagccaattggagaaa
agcaacgcttatgatgtagccgtgcaagtaggtaaatccaccaacattgttaaagaactt
ttcaacgataaaactacggaaggcttggcccgttatgaaaacgtgcaagagttgttgaac
tcgatcaaagagttcaccgaaacgcctaccgaagatggtgagttgctggaaaaaaccttg
ggcgcttatttacaacagatcacattgttgacagatgccgatcaagggaatgatgaagat
agcgatgttgttaaactaatgaccatccacgcagccaaaggattggaatttccggtcgtg
ttttcggtaggattagaagaaactttattccccaatagcatggctatcaactcaagggaa
gagctagaagaagaaaggagattattttacgtggctatcacccgtgccaagtctaagtta
tggatcacttatgcgaatagccgttaccgcttcggtaacctcgttcaaaatgaatccagc
cgttttatcgatgaaattccaccgcaacacctggatcgcagctacgcgggtggcggtgtt
cgtaatatgggaagcacaccctcatggggaggtggtaatggtttgtttgatcgctcgaac
cgtaaaccggccccggggcataaaacaactacttcgatcggtaccaaccccaatcccggc
cccaggccagctactactgtcactaatcacgttccaacggaagggtttgcccctgatgac
ccggtaaacatggaagtaggtatgaaagtagagcaccaaaaatttggtttcggaacgatt
acgagcatggatggcgcgccgaataaccggattgctaccgtgaatttcccggcagcagga
ggggataaaaagatcatgttgaactatgccaaattgatgattattaaataa

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