Chitinophaga caeni: COR50_05385
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Entry
COR50_05385 CDS
T05360
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cbae
Chitinophaga caeni
Pathway
cbae03030
DNA replication
cbae03410
Base excision repair
cbae03420
Nucleotide excision repair
cbae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COR50_05385
03410 Base excision repair
COR50_05385
03420 Nucleotide excision repair
COR50_05385
03440 Homologous recombination
COR50_05385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbae03032
]
COR50_05385
03400 DNA repair and recombination proteins [BR:
cbae03400
]
COR50_05385
Enzymes [BR:
cbae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
COR50_05385
DNA replication proteins [BR:
cbae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
COR50_05385
DNA repair and recombination proteins [BR:
cbae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
COR50_05385
NER (nucleotide excision repair)
GGR (global genome repair) factors
COR50_05385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
Ehrlichia_rpt
DUF3913
Motif
Other DBs
NCBI-ProteinID:
ATL46659
UniProt:
A0A291QRM5
LinkDB
All DBs
Position
complement(1269084..1271897)
Genome browser
AA seq
937 aa
AA seq
DB search
MSKKLFLLDAMALVYRAYYALLRNPRITSKGRNTNAQFGFTNTLFELINKEKPSHMAVAF
DTHAPTERHTDFEDYKANREDAPEDLIEALPDIKRIIEGFNIPVMEVDGYEADDVIGTLA
WQAADAGYEVYMVTPDKDYGQLVRDNIFIYKPPAGGGKEEILGPKEVCEKWQIKRVDQVI
DILGLMGDAVDNIPGIPGVGEKTAMKLLAEYDTLENVIANADNIKGKMGEKIKAGADSAV
LSKKLATIITDVPVEFHEENFGIKPMNPAALAEIFAELEFRTLGKRILGELYQDATQSAV
AVQQDLFSAPVEQKNTPKAATLAPATEQVGLVADKNIENTPHNYILAGTPEEHLTLLQQL
LEQDEICFDTETTGTDANNVELVGMSFSYTPGTAYYVPVPPNREGALEILHTFKPLFDKE
NIIFIGQNLKYDLIVLKWYDIAIKGSIFDTMLAHYLIEPEGRRGMDLLSAQYLGYEPVSI
ETLIGKKGKNQGNMRDVPVEKVKDYAAEDADITLQLKHKFAPIVAEREVSKVFYEIENPL
VKVLTDMEYEGVAIDKQTLSDYSNELQAEIKRAEESVYEQAGVRFNLASPKQLGEVLFEK
LQLDPKAKKTKTGQYATGEDILQKLASKHKIVEDILVFRELTKLKSTYVDALPTMINPRT
GRIHTSYNQAVAVTGRLSSNNPNLQNIPIRTERGREVRKAFVPRDAEHILVSADYSQIEL
RIIAAISKDENMLAAFRSGTDIHTATAAKVYGVEISEVSPDMRRNAKSVNFGIIYGVSAF
GLSENLGISRTEAKGLIDNYFIQYPAIKQYMQDQVAFAKEHGYVQTMLGRKRWLKDINSS
NAVVRGFAERNAINMPIQGTAADMIKLAMISIHKAMQSAGFQSKMILQVHDELIFDVYKP
ELEKLKPLIIEHMKNAMEIDVPIEAELGSGNNWLEAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaattattcttattagatgccatggctttggtgtaccgcgcgtactatgcc
cttttgcgcaacccacgcattaccagcaaaggcagaaacaccaatgcccagtttggtttc
accaatactttatttgaattaatcaataaagaaaagcctagccatatggccgtggcattc
gatacgcatgctcctactgaaagacataccgattttgaagactataaagccaaccgtgaa
gatgctccagaagatttgatcgaggcgctacctgatatcaaaagaatcattgaaggtttt
aatattcccgtgatggaagtggacggatacgaggcggatgatgtaatcggcacgctggct
tggcaagccgccgatgcaggttacgaggtatatatggtgacgcctgataaggactacgga
caattggtgcgggataatatctttatttataaaccccctgccggtggcggtaaagaagaa
atcctgggtccgaaagaggtatgcgaaaaatggcaaataaaacgcgtcgaccaagtcatt
gacatcctggggctgatgggcgatgccgtggataacatccccgggataccgggcgtcggt
gaaaaaacggcgatgaagttattagccgagtatgacacccttgaaaatgtaattgccaat
gccgacaatatcaagggaaaaatgggtgaaaaaattaaggccggggcggatagcgctgtt
ttatccaagaaattagctaccatcatcacggatgttcccgttgagtttcacgaggaaaac
ttcggcattaaaccgatgaaccccgctgctttggcagaaatatttgccgagctggaattc
cgtactctcggtaaaaggatcttgggcgaattataccaggatgctacgcagtctgccgtg
gcagtgcaacaagatctgtttagcgctccggttgaacaaaaaaatacgcctaaagcagca
acactcgcacccgctaccgagcaggtcgggttggtcgcagataagaacatcgaaaatacg
ccgcataattatattctcgcaggtacgcccgaagagcatttaacgctattacaacagctc
ctggaacaagatgagatctgcttcgataccgaaactactggtaccgatgcgaataatgtg
gaattagtcggaatgagcttttcctatactcccggcacggcctattatgtgcctgttcca
cctaaccgggaaggcgcgctggagattttgcacaccttcaaacccttattcgataaggaa
aatattatttttatagggcagaatcttaaatacgatttaatcgtgctgaaatggtatgat
atcgctatcaagggcagtatttttgatacgatgttggcacattaccttattgaaccggaa
ggcaggcgtggcatggatttgctcagcgcccaatacctgggctacgaaccggtttcgata
gaaacactgattggcaaaaagggcaaaaaccaaggcaatatgcgcgatgttcccgtggaa
aaagtaaaagattatgctgctgaagatgctgatatcacgcttcaattaaaacataaattc
gcccctatcgtagccgaacgtgaagtgagcaaggtattctacgaaatcgaaaatcccctg
gttaaagtgctgacggatatggaatatgagggtgtggccatcgataaacagactttatcc
gattattctaacgagttacaagcagaaatcaaacgggcggaagaaagtgtttacgaacag
gctggtgttcgattcaacctggcttctcctaaacaattaggggaagtgctgttcgaaaaa
ttacaattagatccgaaagcaaagaaaactaaaacaggacaatatgctaccggtgaggac
atcctccaaaaactcgcatcaaaacataaaatcgtggaagatatcctggtgttccgggaa
ctaaccaaattgaaatctacttacgtggatgcgcttcccacgatgattaatccgcgcacg
ggaagaatacatacgtcttacaaccaggctgtggcagtgaccgggcgattgagttccaat
aatccgaacctgcaaaatatcccgatccgcaccgagcggggacgtgaggtcaggaaggct
ttcgttccgagggatgcagaacacatcttggtatcggctgattactcccaaattgaattg
cggattatcgcggctatcagtaaagatgaaaatatgctggcggccttccgctccggaacc
gacatccatacggccacggctgctaaggtttacggcgttgaaatttcagaggtaagtccc
gatatgcgccggaatgctaaaagtgtgaacttcggtattatatacggtgtgagcgctttc
gggctatcagaaaacctcggaatttcaagaacagaagccaaggggctcatcgataattat
ttcatccaatatccggcaattaagcagtacatgcaagaccaggtagcgtttgcaaaagag
catggctatgtacaaaccatgctgggtcgtaaacgctggttaaaagacattaattcatcc
aatgccgtggttcggggctttgcagaacgcaacgccattaacatgccgatccagggtaca
gcagcagatatgattaaacttgccatgatctcgattcataaagctatgcaatcagcagga
ttccaatccaagatgatactgcaagtacatgatgagttgatctttgatgtgtataagccg
gaactcgaaaaactcaaaccgctaattatcgagcatatgaaaaacgcgatggaaatcgat
gtgccgatcgaagcagagctaggttcggggaataactggttggaggcccattaa
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