Chitinophaga caeni: COR50_05785
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Entry
COR50_05785 CDS
T05360
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
cbae
Chitinophaga caeni
Brite
KEGG Orthology (KO) [BR:
cbae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbae02000
]
COR50_05785
Transporters [BR:
cbae02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
COR50_05785
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
TPR_1
Motif
Other DBs
NCBI-ProteinID:
ATL46731
UniProt:
A0A291QS45
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All DBs
Position
1369232..1370737
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AA seq
501 aa
AA seq
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MKNFIKGIVGVALLAVTATSCDLKKEPYTAISDETFLHDESKWPVITAGNYYFLKDEYFT
RNYYMMGEYPGDNVALSGGTSDALYYSYTYQHLKNQGNANQIWRKGYQAINGANKIIEVM
PEGRDAATDQLIGENLFIRAFVHFSLCRIFARPYNQGADNPGVPVMLKPDVNAMPARNTV
KEVYDAVIADLLKAKDLMTEDKECSYATKEAAEALLSRVYLYKEDNQLAKDYADSVLLSN
KYSLTSTASFPGYYAANQASTSETIFCIRHTIQDDRDWSSIGSMYYTSPSGLGYGEMYAS
LDYVDLIEKYPNDVRNKFIVVPDPLKSKVDPSKDSVDATGRIVRVNRNGVPKYFILKFAN
QDNIPTLSSPIVLRLAEMYLNRAEANAKLGNTDDAIEDVNTIRQRAGLSGAALYTVDDLK
GHASVLDVVLEERRLELAFEAHRPYDLFRNKKDMVRNYVGQQEKVLPPDQLPQVVKYTDD
RIVHYIPEQDILLNNNLEQNP
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttcataaaaggaatcgtgggtgttgccttgcttgctgttactgcaacctct
tgcgatctgaaaaaagaaccatataccgctatctctgatgagactttcttgcatgatgaa
tccaagtggccggtaattacagcaggtaattattacttcttaaaagatgaatattttact
cgtaactattatatgatgggggagtacccgggcgataacgtggccttgagcggcggtacc
tccgatgccttgtattattcttatacatatcaacatctgaaaaatcagggtaacgccaac
cagatctggagaaagggctaccaagcgatcaacggtgccaacaagatcatcgaggtgatg
ccggaaggccgcgatgcggctacggatcagttaatcggtgaaaacctgttcatccgcgct
ttcgtgcatttctccctttgccgcatttttgcgcgcccttacaaccaaggagcagataac
ccgggtgttcccgtaatgctgaaaccggacgttaatgccatgcctgcacgtaacaccgtg
aaagaagtgtatgatgccgtaatcgctgatttgttgaaggctaaagacctgatgaccgag
gataaggaatgcagctacgcgacgaaagaagcggcggaagcattattatcaagggtatat
ttatataaagaagataaccaattagccaaagattatgctgattccgtgttgttatcaaat
aaatatagcctgacttcaacggctagtttccccggttattacgcggctaaccaagcttct
acttcggagacaattttctgtatccggcatactattcaagacgatagggattggtcttct
atcggttcgatgtattatacctcgccttcaggtttaggatacggtgagatgtatgcttca
ttagactatgttgatttaattgaaaaatacccgaacgatgttaggaataaatttatcgtg
gttcctgatcctttaaagtctaaagttgatccaagcaaggattcagtagatgctacgggc
cgcatcgtgcgcgttaataggaacggggttccgaaatactttatcctgaaattcgcaaac
caggataatatcccgactttaagtagccccatcgtattgcgtttggccgaaatgtatcta
aaccgtgcagaggctaatgccaagttgggcaatacggatgatgcgattgaagacgtaaat
actatccgtcaacgcgctggtctttccggtgcagctttatatacggttgatgatcttaaa
ggtcatgcgtctgttctggatgtggttttggaagagcgccgcttggagttggcgttcgaa
gcacaccgcccgtatgacttgttccgtaataagaaagatatggttaggaattatgtcggt
caacaagagaaagtattacctcccgatcaattaccacaggttgttaagtatacagatgat
aggattgttcattatatacctgaacaagacatccttttgaataataacttggaacaaaat
ccgtaa
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