KEGG   Chitinophaga caeni: COR50_06020
Entry
COR50_06020       CDS       T05360                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
cbae  Chitinophaga caeni
Brite
KEGG Orthology (KO) [BR:cbae00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbae03400]
    COR50_06020
DNA repair and recombination proteins [BR:cbae03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     COR50_06020
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB ChlI DnaB_C Lon_C AAA AAA_22 AAA_16 Elong_Iki1 nSTAND3 KdpD AAA_24 AAA_14 DEAD NTPase_1 HypA AAA_5 DZR TniB DUF7125 SLFN-g3_helicase TackOD1 zf-RING_10 DUF7129
Other DBs
NCBI-ProteinID: ATL46766
UniProt: A0A291QS58
LinkDB
Position
1421555..1422931
AA seq 458 aa
MSKIKTAFFCQACGYESAKWTGKCPSCNSWNTFVEEKIQKDISPRHYDWRDSKEAHVAKT
KIVQLSAVEGAEERRILTPDAELNRVLGGGIVEGSLVLVGGEPGIGKSTLFLQNALALKG
IKILYVSGEESEQQIKMRADRLNILNDDFYLLTETSTQEIFQEIKKLQPNLVIVDSIQTL
HSPMIDSAPGSVSQVRETTAELQRFAKESQVPVFIIGHITKDGAIAGPKVLEHMVDTVLQ
FEGDQHYAYRILRTIKNRFGSTAELGIYEMTGNGLRQVSNPSEILISQREDQLSGIAIAA
TIEGLRPMLIEVQALVTQSVYGTPQRTATGFDLRRLQLLLAVLEKRGGFHFGVKDVFLNI
AGGIRVEDPSIDLAVLCSLLSSYEDIPLSNHVCFAGEVGLSGEIRAVNRIEQRIAEAEKL
GFEKIFISKYHKKGLNLSKFKIEIVPVGRVEEVYQLLF
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgagtaaaattaaaacggctttcttctgccaggcttgtggttatgaatctgcaaaatgg
accggtaagtgtccttcttgtaatagttggaatacattcgtcgaagaaaaaattcaaaaa
gatatttccccgaggcattatgattggagagactccaaagaggcgcatgttgctaaaacg
aagatcgtgcaattgtcggcggttgaaggtgctgaagaaaggcggatactcactcctgat
gcggaattgaatagggtgcttggtggaggtatcgttgaaggttcgctcgtcctcgttggt
ggtgaaccgggtattggtaaatcaactttgttcttacagaatgcgctggctttaaaagga
attaaaatactttatgtaagcggtgaagagagtgaacaacaaataaaaatgcgggcggat
cgcttgaatattttgaacgatgatttctacctgctaacggaaacctccacccaagaaatt
ttccaagagattaaaaagttgcaaccgaacttggttatcgtcgactctattcaaacactt
cattcccccatgatcgattcagctcccggcagcgtttcccaggtgagggaaacaactgct
gaattgcaacgtttcgcgaaggaatcacaagttcccgtttttataatcggtcatatcacc
aaggatggagccatcgccggaccaaaagttttggagcatatggtagataccgttttgcag
ttcgagggagatcaacattatgcataccggatattgcgaactattaaaaatcgtttcggc
tccacggctgaactgggtatctatgaaatgaccggcaatggcttgcgccaagtgagcaat
ccttcggagatattaatatcccagagggaagaccagctgagcgggatcgcgatagcggcc
actattgaagggttaagaccgatgttgatcgaggtgcaggccttggtcacacaatccgtt
tacggtaccccgcaacgaacggcgacgggtttcgatttgcgtaggttgcaattgttgctg
gccgtgttggaaaaacggggtggctttcatttcggtgtgaaggacgtatttttaaatatc
gccgggggaataagggtagaagatccctcgatcgatttagccgttctttgttcattgctt
tcttcgtatgaagatatcccgctttcgaaccatgtttgttttgcaggggaggtaggatta
agcggggaaatccgcgcggtaaaccgtattgaacaaaggatcgcggaagcggagaaactt
ggctttgaaaaaatctttatttccaaataccataaaaagggattaaacctctccaagttt
aagatagaaattgttcctgtcgggagggtagaagaggtataccaattgttattttaa

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