Chitinophaga caeni: COR50_06020
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Entry
COR50_06020 CDS
T05360
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cbae
Chitinophaga caeni
Brite
KEGG Orthology (KO) [BR:
cbae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbae03400
]
COR50_06020
DNA repair and recombination proteins [BR:
cbae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
COR50_06020
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA
AAA_22
AAA_16
Elong_Iki1
nSTAND3
KdpD
AAA_24
AAA_14
DEAD
NTPase_1
HypA
AAA_5
DZR
TniB
DUF7125
SLFN-g3_helicase
TackOD1
zf-RING_10
DUF7129
Motif
Other DBs
NCBI-ProteinID:
ATL46766
UniProt:
A0A291QS58
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All DBs
Position
1421555..1422931
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AA seq
458 aa
AA seq
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MSKIKTAFFCQACGYESAKWTGKCPSCNSWNTFVEEKIQKDISPRHYDWRDSKEAHVAKT
KIVQLSAVEGAEERRILTPDAELNRVLGGGIVEGSLVLVGGEPGIGKSTLFLQNALALKG
IKILYVSGEESEQQIKMRADRLNILNDDFYLLTETSTQEIFQEIKKLQPNLVIVDSIQTL
HSPMIDSAPGSVSQVRETTAELQRFAKESQVPVFIIGHITKDGAIAGPKVLEHMVDTVLQ
FEGDQHYAYRILRTIKNRFGSTAELGIYEMTGNGLRQVSNPSEILISQREDQLSGIAIAA
TIEGLRPMLIEVQALVTQSVYGTPQRTATGFDLRRLQLLLAVLEKRGGFHFGVKDVFLNI
AGGIRVEDPSIDLAVLCSLLSSYEDIPLSNHVCFAGEVGLSGEIRAVNRIEQRIAEAEKL
GFEKIFISKYHKKGLNLSKFKIEIVPVGRVEEVYQLLF
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaattaaaacggctttcttctgccaggcttgtggttatgaatctgcaaaatgg
accggtaagtgtccttcttgtaatagttggaatacattcgtcgaagaaaaaattcaaaaa
gatatttccccgaggcattatgattggagagactccaaagaggcgcatgttgctaaaacg
aagatcgtgcaattgtcggcggttgaaggtgctgaagaaaggcggatactcactcctgat
gcggaattgaatagggtgcttggtggaggtatcgttgaaggttcgctcgtcctcgttggt
ggtgaaccgggtattggtaaatcaactttgttcttacagaatgcgctggctttaaaagga
attaaaatactttatgtaagcggtgaagagagtgaacaacaaataaaaatgcgggcggat
cgcttgaatattttgaacgatgatttctacctgctaacggaaacctccacccaagaaatt
ttccaagagattaaaaagttgcaaccgaacttggttatcgtcgactctattcaaacactt
cattcccccatgatcgattcagctcccggcagcgtttcccaggtgagggaaacaactgct
gaattgcaacgtttcgcgaaggaatcacaagttcccgtttttataatcggtcatatcacc
aaggatggagccatcgccggaccaaaagttttggagcatatggtagataccgttttgcag
ttcgagggagatcaacattatgcataccggatattgcgaactattaaaaatcgtttcggc
tccacggctgaactgggtatctatgaaatgaccggcaatggcttgcgccaagtgagcaat
ccttcggagatattaatatcccagagggaagaccagctgagcgggatcgcgatagcggcc
actattgaagggttaagaccgatgttgatcgaggtgcaggccttggtcacacaatccgtt
tacggtaccccgcaacgaacggcgacgggtttcgatttgcgtaggttgcaattgttgctg
gccgtgttggaaaaacggggtggctttcatttcggtgtgaaggacgtatttttaaatatc
gccgggggaataagggtagaagatccctcgatcgatttagccgttctttgttcattgctt
tcttcgtatgaagatatcccgctttcgaaccatgtttgttttgcaggggaggtaggatta
agcggggaaatccgcgcggtaaaccgtattgaacaaaggatcgcggaagcggagaaactt
ggctttgaaaaaatctttatttccaaataccataaaaagggattaaacctctccaagttt
aagatagaaattgttcctgtcgggagggtagaagaggtataccaattgttattttaa
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