Chitinophaga caeni: COR50_06255
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Entry
COR50_06255 CDS
T05360
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
cbae
Chitinophaga caeni
Brite
KEGG Orthology (KO) [BR:
cbae00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cbae01002
]
COR50_06255
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbae01011
]
COR50_06255
Peptidases and inhibitors [BR:
cbae01002
]
Cysteine peptidases
Family C82
COR50_06255
Peptidoglycan biosynthesis and degradation proteins [BR:
cbae01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
COR50_06255
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ATL46811
UniProt:
A0A291QSC1
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Position
1479870..1481549
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AA seq
559 aa
AA seq
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MRFHLRFLLLASCVMALFVSCEQGSGKRQAPIMRDSTHYTEEEYINLAIDSNQLNTFLQK
NAAYAPYTDFIKDFYTKRDFHYAWISATGPTEQASSFINMIRTDAHFGIGDSSLMNKELG
ALFDTLNNRVNDKEWKPNDSLVSKTEMLMTAQFFAYGDKVWGGMTADSAKDLEWFIPRKK
MDMASLLDSLIANPNQDLSGNEPVNKQYRLLRKELSRINKIAEEIPHDSLFLDKKTYKKG
DSAAVIAKVKERLHAWGDLPNLDSSAIFDAGLDSAIRHYQGRMGLTVNGQLQQATINSLN
VPVAKLVEKILINMERLRWVPVDVKGEYILVNIPEFKLHVFDHDSLAWSCNVVVGTPGAS
TVIFSREMKYVVFAPYWNVPPGILSREILPAVKRNPSYLARHNMEVVGASGKVIPTSSIS
WSKYTGRNFPYIIRQKPGRSNSLGKVKFLFPNEYNIYLHDTPSKHLFQETKRSFSHGCIR
VSEPRRLAEYLLRHDSTWTDKKIDEAMNAKKEKYVVLKDKVPVFIGYFTAWVNHNGVLNF
RNDVYGHDAQLAKQLFSKE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttcatttgagatttttactcctagctagttgcgtgatggcattatttgtttcc
tgtgaacagggaagtgggaaaaggcaagccccgatcatgagagatagcacgcactataca
gaggaagagtatattaacctggctattgatagcaatcaactcaatacatttttacaaaag
aatgcagcatatgccccatatacagattttataaaagatttttataccaagagagatttt
cactatgcttggatctctgctaccgggccaacagaacaagcatcgagcttcattaacatg
atccgaaccgatgcccattttggtattggcgatagcagtcttatgaataaagaactcggc
gcgttattcgatacgctcaacaaccgcgtcaatgataaagagtggaagcccaacgatagc
ttggtttctaaaaccgagatgttaatgacagcgcagttcttcgcttatggagacaaagtt
tggggaggaatgacagcagattcagcgaaagatttggaatggtttatcccccggaaaaag
atggatatggccagcttgcttgactcgctaattgcgaaccctaaccaagacttaagtggc
aatgagcctgtaaataagcaataccgtttattaagaaaggaactttccaggataaataaa
atagcggaagagataccgcacgattctttgttcctcgacaaaaagacatataaaaaaggc
gattccgctgccgtgattgccaaggttaaagaacgcctgcatgcttggggcgatttaccc
aacttggattcaagcgcaatatttgatgcggggctagactctgctattaggcattaccag
ggccgcatgggtctaacggttaacggccagttgcaacaggcaactattaattctttgaat
gtgcccgttgcaaaactggtagaaaagatattgattaatatggagcgtttgcgctgggtg
ccggtagatgtgaagggggagtatatcctggtaaacatcccggaatttaaattgcatgtt
tttgatcacgattctttagcatggagttgtaacgtggtagtgggaacgcccggcgccagc
acggtgatctttagccgcgaaatgaaatacgttgtcttcgcaccgtattggaatgtgcca
ccgggaattttatctagggaaatattaccggcagtaaaacgcaatccatcatacctggca
aggcataacatggaagtggtaggtgccagcggtaaggtgataccaacttcatctataagc
tggtcgaaatatacgggtagaaatttcccctatatcatacggcagaagccgggtcgctcc
aattccctgggaaaggtaaagtttctatttcccaacgagtataacatctatttacacgat
accccttcgaaacatcttttccaagaaacgaaacgatctttcagccatggctgcatccgt
gtttccgaaccccgtaggctagccgaatatttgcttcgacatgattccacttggaccgat
aaaaagatcgatgaagcgatgaatgcgaagaaggaaaaatacgtggtgctgaaagataaa
gtacccgtgtttataggttattttacagcttgggtaaatcataacggcgtattgaatttc
cgtaacgatgtttatgggcatgatgcgcagctagcaaagcagttgttttcgaaggagtag
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