KEGG   Chitinophaga caeni: COR50_11770
Entry
COR50_11770       CDS       T05360                                 
Name
(GenBank) hypothetical protein
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
cbae  Chitinophaga caeni
Pathway
cbae02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cbae00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    COR50_11770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbae03021]
    COR50_11770
Transcription machinery [BR:cbae03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     COR50_11770
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 GerE Sigma70_ECF HTH_10 HTH_24 TFIIF_beta PF0610-like_N HTH_11 HTH_23 HTH_40 HTH_5
Other DBs
NCBI-ProteinID: ATL47788
UniProt: A0A291QUZ6
LinkDB
Position
complement(2777878..2778423)
AA seq 181 aa
MHRIAELQGDNEAVFRDIFNEFHAPLYTFLYQKLSSDYLAKEVVQLTFIKLWRYRRSLDP
AVDIAIQIFRIAKTTLIDEIRKIQTRQKYYQVIPIGGSLHGEILPTIYYKETLSKIEQLM
HLLPPKRREVFRLSKIYCHTNKEIAAKLSISPKTVEQHITLALRFMKPFFQVLLIIFYIV
N
NT seq 546 nt   +upstreamnt  +downstreamnt
atgcacagaattgctgaattacaaggggataatgaagctgttttccgtgacatcttcaat
gaatttcacgctcccctctatacttttttgtatcaaaaattatcatcggattacctggcc
aaagaagttgtacagctaacattcataaaattgtggcgctaccgacggagtcttgatccc
gctgtagacatcgccatccaaattttccggattgctaagacaaccttgatcgatgaaatc
cgcaagattcaaaccaggcaaaagtactaccaggtaattccaataggcggcagcctgcac
ggggaaatattacctacgatatattataaagaaaccttgtcgaaaatcgagcagctcatg
catttgttgccaccgaaaagaagggaggtttttagattaagtaaaatatattgtcataca
aataaagagatcgcggcaaaattatccatctcccctaaaaccgtggagcaacatattacc
ttggccctgcgttttatgaagccatttttccaagtactgttaataattttttatattgtt
aactaa

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