Chitinophaga caeni: COR50_11770
Help
Entry
COR50_11770 CDS
T05360
Name
(GenBank) hypothetical protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cbae
Chitinophaga caeni
Pathway
cbae02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cbae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
COR50_11770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbae03021
]
COR50_11770
Transcription machinery [BR:
cbae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
COR50_11770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_10
HTH_24
TFIIF_beta
PF0610-like_N
HTH_11
HTH_23
HTH_40
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ATL47788
UniProt:
A0A291QUZ6
LinkDB
All DBs
Position
complement(2777878..2778423)
Genome browser
AA seq
181 aa
AA seq
DB search
MHRIAELQGDNEAVFRDIFNEFHAPLYTFLYQKLSSDYLAKEVVQLTFIKLWRYRRSLDP
AVDIAIQIFRIAKTTLIDEIRKIQTRQKYYQVIPIGGSLHGEILPTIYYKETLSKIEQLM
HLLPPKRREVFRLSKIYCHTNKEIAAKLSISPKTVEQHITLALRFMKPFFQVLLIIFYIV
N
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaattgctgaattacaaggggataatgaagctgttttccgtgacatcttcaat
gaatttcacgctcccctctatacttttttgtatcaaaaattatcatcggattacctggcc
aaagaagttgtacagctaacattcataaaattgtggcgctaccgacggagtcttgatccc
gctgtagacatcgccatccaaattttccggattgctaagacaaccttgatcgatgaaatc
cgcaagattcaaaccaggcaaaagtactaccaggtaattccaataggcggcagcctgcac
ggggaaatattacctacgatatattataaagaaaccttgtcgaaaatcgagcagctcatg
catttgttgccaccgaaaagaagggaggtttttagattaagtaaaatatattgtcataca
aataaagagatcgcggcaaaattatccatctcccctaaaaccgtggagcaacatattacc
ttggccctgcgttttatgaagccatttttccaagtactgttaataattttttatattgtt
aactaa
DBGET
integrated database retrieval system