Chitinophaga caeni: COR50_11945
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Entry
COR50_11945 CDS
T05360
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
cbae
Chitinophaga caeni
Brite
KEGG Orthology (KO) [BR:
cbae00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
COR50_11945
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
HHH_7
S1_RRP5
YqgF
T2SSK
UBA_HYPK
HHH_6
Motif
Other DBs
NCBI-ProteinID:
ATL47817
UniProt:
A0A291QV55
LinkDB
All DBs
Position
complement(2812099..2814354)
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AA seq
751 aa
AA seq
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MNLKHIELISAELGISKKQAENTMNLLNEGSTVPFISRYRKEVTGSLDEVQIARIEDLQK
RYKEVDDRRAFIIKTITEQEKMTPELLEKIESTWQLNELEDIYLPYKPKRKTRATVAIEK
GLEPLAKILFEQEDINLDEIAQTFINEQVASNDEALKGARDIIAEWVNENAEARDKVRKI
FTNTGKLSAKVIEGKEEEAAKYKDYFNFNEDIMEMPSHRVLAILRGEAEGFLYGTIAPAE
EDALEILTKQFVKKKNAAGEQITKAITDAYKRLMRPSLENEFRALIKERADGEAIDVFAE
NLRQLLLAAPLGPKPVLAIDPGYRTGCKLVALDSQGNMLDHDVIFPLEKNYKRDDAEKLL
QSWVNRYDSAAIAVGNGTAGRETEEFVKKIDFGKKVIVFMVNESGASVYSASEVAREEFP
DQDVTVRGAVSIGRRLIDPLAELVKIDPKSIGVGQYQHDVNQSSLKQSLDRVVVSCVNNV
GVNLNTASKHLLAYVSGLGPSLADNIVKFRKENGVFRNRLELKKVPRLGEKAFEQCAGFL
RIENGDNPLDNSAVHPERYPLVEQMAQQLNSTVQDLMSQEPLRKKINVKEYVSEEVGLLT
LEDILKELDKPSRDPRDEISIFEYAEGIHKMEDLKVGMQLPGVVTNITAFGAFVDVGVKQ
DGLVHISHLSNKFISNPNEAVKLNQKVTVTVLEIDIARKRISLSMKDSEPAASRNREPRK
EGRREPAKSQKKEAPVNDFKASLEALKNKFK
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaagcacattgagcttatctcggcagaattgggcatttcaaagaagcaagca
gaaaacacgatgaacttgctcaatgaaggttccaccgttccttttattagccgctaccgt
aaagaagttaccgggagcctcgacgaagtgcaaattgcccgcattgaagatcttcaaaag
agatataaagaggtggatgatcgccgggctttcattattaaaaccatcacggagcaagag
aaaatgacgccggaattgctggagaaaatagaaagcacctggcaattgaatgaactggaa
gacatttacttaccatataaacccaagcgtaaaaccagggctacagtggccatcgagaaa
ggcttggaaccccttgcaaaaattttgttcgagcaggaagacattaacctagatgaaatt
gcacaaacatttattaacgaacaggttgccagcaatgatgaagctttaaaaggcgcccgc
gatatcatcgcggaatgggtgaacgagaatgctgaggcacgtgataaggtgcgtaaaata
tttacaaatacaggaaaattatccgcgaaagttatcgagggcaaagaagaagaagccgcc
aaatacaaggattatttcaacttcaacgaggacattatggaaatgccttcgcacagggtg
ttagccatcttgcgcggggaagcggaaggtttcctttacgggacaatcgcgccggccgag
gaagatgcgctcgaaatattgaccaagcagttcgtgaaaaagaaaaatgcagcgggagaa
caaatcaccaaggccatcacggatgcttataaacgactgatgcgcccctccttggaaaat
gaattccgggctcttataaaggaacgtgcagatggggaagccatcgatgtattcgctgaa
aatttacgccaacttttattagccgctccattggggccgaaacccgttttggcaatcgat
ccgggctaccgtacgggatgtaaattagttgcgctcgacagccagggaaacatgttagat
cacgatgtgatcttcccgctggagaaaaactataagagggatgatgcggaaaagctactc
caatcttgggtaaaccgctacgattctgccgccatcgccgtaggtaacggaaccgccgga
agggaaacagaagaatttgtaaagaaaattgatttcggtaaaaaggtaatcgtgttcatg
gtaaacgaaagcggggcatccgtttactccgcatcggaagtggccagggaagagttcccc
gaccaggatgttaccgtgaggggcgccgtatcgatcggtagaaggctaattgacccattg
gcagagttggtgaagatcgaccctaaatcaatcggcgttgggcaataccaacacgatgtc
aatcaaagcagcttgaaacaaagcctggatcgcgtagttgtgagctgcgtgaataatgtc
ggcgtaaacctcaataccgcatcaaaacacctgctagcttacgtatctggcctcggacca
tccttggcagataatatcgttaagttccgcaaggaaaacggcgtcttcagaaacaggttg
gagcttaaaaaagtgccgcgactgggagaaaaagccttcgaacaatgcgccggtttcttg
agaatcgaaaatggggataacccgctcgacaactctgccgttcacccggaacgctacccg
ctggtagaacagatggcacagcaactgaatagcaccgtgcaggaccttatgagccaggag
ccattgcgtaaaaaaatcaatgtaaaagaatatgtcagcgaagaagtaggcttgcttacc
ttggaagatatactcaaagaattggataaacctagccgtgacccaagggacgagatatca
atattcgaatacgcggaaggtattcacaagatggaagacttgaaagtgggcatgcaatta
ccgggcgtcgtaaccaatattacggccttcggtgcattcgtagatgtcggcgtaaaacaa
gacggcctggtgcatatctcccatttatctaataaattcattagcaatcctaacgaagcg
gttaaattaaaccagaaagttaccgttaccgttctcgaaattgacatcgctagaaaaaga
atttcactttctatgaaagatagcgaaccggcagcttccaggaacagggagccgagaaaa
gaaggaagaagggagcccgcgaaatcacagaaaaaagaagcgccggttaatgactttaaa
gcaagcttggaagcgttaaaaaataaatttaaataa
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