Chitinophaga caeni: COR50_13560
Help
Entry
COR50_13560 CDS
T05360
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
cbae
Chitinophaga caeni
Brite
KEGG Orthology (KO) [BR:
cbae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbae03016
]
COR50_13560
Enzymes [BR:
cbae01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
COR50_13560
Transfer RNA biogenesis [BR:
cbae03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
COR50_13560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ATL48107
UniProt:
A0A291QVZ0
LinkDB
All DBs
Position
complement(3221759..3223174)
Genome browser
AA seq
471 aa
AA seq
DB search
MLDQKVHDESRQGEAYAPGVETVNEFAKKFYIESYGCQMNFNDSEIVASILQNEGFGATR
NYEEADFILLNTCSIREKAEQTVRTRLTEFRKLKRGKPGMLVGVLGCMAERLKSKFLEEE
KLVDIVVGPDAYRTLPGLIQEAETGQKAINVLLSREETYADINPVRLDSNGVTAFVSIMR
GCNNMCTFCVVPFTRGRERSRDPHSIVAEARDLYDRGFREVTLLGQNVDSYYYINGEDQS
TNFAQLLEKVALISPLLRVRFSTSHPKDITDEVLYTMAKYENICKYIHLPVQSGSTRVLQ
LMNRTYTREWYMKKVDRIKEILPGCGISTDIITGFCTETEEDHRDTLDIMEYAKYDLAYM
FAYSERPGTLAARRYQDDVPDEVKKRRLTEVVSLHRRHALEGMQQEVGKTLKVLIEGTSK
RSEEQLFGRTDQNRVVVFPREHYKKGEYVMVKVNDCTAATLLGEVVEPVEA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgttggatcaaaaagtgcacgatgaaagtcgccaaggtgaagcatacgctcccggggta
gaaacggtaaatgaatttgcgaaaaaattctatatagaaagctatggttgtcaaatgaac
ttcaacgatagtgaaattgtcgcttcaatcttgcaaaacgaaggattcggggctaccagg
aattatgaagaagcagattttatattgttaaatacttgctctatccgcgaaaaggccgaa
caaacggttcgtacacgcttgacggaattccgcaagctgaaacgcggcaaaccggggatg
ctagtcggggtattgggttgtatggccgagcggctgaagtctaagttcctcgaagaagaa
aaattggtagatatcgtggtgggtcctgatgcttaccgtacccttcccgggctgatccaa
gaagccgaaaccgggcaaaaagcgatcaacgtgttactgagccgcgaagaaacatatgca
gatatcaaccccgttagactagatagcaacggcgtcaccgccttcgtatcgatcatgcgt
ggctgcaataatatgtgcaccttctgcgtggtaccttttacacgcggccgcgaacgcagc
cgggatccccactcgatcgttgcagaagcgagggacttatatgacaggggcttccgcgaa
gtgaccctgctgggacaaaatgttgattcttactattatataaatggtgaggaccaaagc
accaacttcgcgcaattgctcgaaaaagtggctttgatctcccccttattacgcgttcgt
tttagtacttcacaccccaaggatattacggatgaagtactctacacgatggctaagtac
gagaacatttgcaaatacatccacctgccggttcaaagcggcagcacgcgggtactgcaa
ctgatgaaccgtacttatacgcgcgaatggtacatgaagaaagtagatcgtatcaaggaa
atcctgccgggttgcggcatttctaccgacatcatcaccggtttctgcacggaaacggaa
gaagatcaccgggatacgctcgacatcatggaatatgccaagtacgatttagcgtatatg
tttgcctattcggagcgcccaggtacattggcagcccgcaggtaccaagacgatgttcca
gacgaagtaaagaaaagaagattgacggaagtggtaagtcttcaccgcaggcacgccttg
gagggcatgcaacaggaagtaggcaaaaccttgaaagtgctgatcgaaggaacctccaaa
cgctccgaagaacaattatttggacgtaccgatcaaaaccgcgttgtcgtattcccaagg
gaacattacaagaaaggggaatatgtcatggtaaaagtaaatgactgcacggcggctacc
ctgttgggagaagttgtagagcccgtagaagcataa
DBGET
integrated database retrieval system
