Chitinophaga caeni: COR50_13845
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Entry
COR50_13845 CDS
T05360
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cbae
Chitinophaga caeni
Brite
KEGG Orthology (KO) [BR:
cbae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbae03009
]
COR50_13845 (rimO)
Enzymes [BR:
cbae01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
COR50_13845 (rimO)
Ribosome biogenesis [BR:
cbae03009
]
Prokaryotic type
ribosomal protein modification factors
COR50_13845 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
ATL48159
UniProt:
A0A291QVU7
LinkDB
All DBs
Position
3284920..3286227
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AA seq
435 aa
AA seq
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MKTRTLKKDKVNIITLGCSKNMVDSEVLSGQLKANDVDVVHESGKRDHNIVVVNTCGFID
KAKEESVNTILDQVDLKRQGRLDKVYVTGCLSERYRGDLEKEIPEVDAWFGTMELPLILK
KFDADYKVELLGERMLSTPSHYAYMKIAEGCNRTCAFCAIPLMRGKHVSKPIEELVAEAE
RLVKMGVKEIMLIAQELTYYGLDLYKKRRLADLMNALADVEGLEWIRLHYAYPTKFPMEI
LQVMKERDNICNYLDMPLQHISDPMLKAMKRQISRQEILDLIKAIREEVPGICLRTTLIT
GFPGETLEDVEDVKAFLEEVRFDRVGVFTYSHEEGTTAHDMDDDVPAEEKERRAQDIMEV
QQEISLEKNQEKLGKIYKVIIDKKEAGRFIGRTEFDSVEVDNEVIINTNRRLKPGEFVNV
RITKAYDYDLEGELV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacaagaactttaaagaaagacaaagtaaacattatcacattaggttgttctaag
aacatggttgattccgaagtattaagcggtcagcttaaggctaacgatgttgacgtggtt
catgaaagtggcaaacgtgatcacaatatcgtggtagtcaacacatgtggatttatagac
aaggctaaggaggaatcggttaataccattcttgaccaggtggatcttaaacgccagggg
cgtttggataaagtatatgttaccggttgcttgagcgaaaggtaccgcggggatctagaa
aaagaaattcccgaggtggatgcttggttcggtaccatggaactacccctgatcttgaag
aaatttgatgcggattataaagtggagttgttgggagagcgcatgctcagcacgccctcg
cattacgcttacatgaaaattgccgaaggctgtaaccgaacatgcgccttctgtgccatc
ccgttgatgcgtggcaaacacgtttccaaaccaatcgaagaattggttgcggaagctgaa
aggctggtaaagatgggcgtcaaggaaatcatgctgatcgcgcaagaattgacttactat
ggcctggatctttataaaaaacgtcgcttggcagatttaatgaatgccttggctgacgtg
gaaggcttggagtggatccgtttgcattacgcgtatcctaccaagttcccgatggagatt
ttgcaggtcatgaaagaacgtgacaatatttgtaattacctagatatgccgcttcaacat
atctctgatcccatgttgaaggccatgaaacgccagatttcccgccaggaaatcctggat
ctgatcaaggccatcagggaggaggtacccggcatttgcttgaggacgaccctgatcacc
ggattcccaggggaaaccctcgaagatgtagaagatgtaaaagccttcttggaagaagtg
cgcttcgacagggtgggtgtatttacttacagccacgaagaaggtactactgctcacgat
atggatgatgatgtgccggcggaagaaaaagagcgccgcgcgcaagatatcatggaagtg
cagcaggaaatctcgctggagaaaaaccaggagaaactcgggaagatctacaaggtaatc
atcgataaaaaagaagctggtcgctttattggcagaaccgaatttgattcggttgaagtt
gacaatgaagtgattatcaacacaaaccgcaggttgaagccgggtgaattcgtgaatgtt
cgtatcacgaaagcatacgattacgacctcgaaggcgagctggtgtaa
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